Gene GWCH70_0005 details

Gene Information

• Locus tag: GWCH70_0005
• Symbol: gyrB
• ID: 7978439
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacillus sp. WCH70
• Kingdom: Bacteria
• Replicon accession: NC_012793
• Strand: +
• Start bp: 4180
• End bp: 6102
• Gene Length: 1923 bp
• Protein Length: 640 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 644796954
• Product: DNA gyrase subunit B
• Protein accession: YP_002948213
• Protein GI: 239825589
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01059] DNA gyrase, B subunit; [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00215329
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAATGG AACAAAAAAT CGAACATACG TATGATGCGA GCCAAATTCA AGTATTAGAA 
GGGCTGGAAG CAGTCCGTAA ACGGCCGGGG ATGTATATTG GTTCCACGGG TCCAAAAGGA 
CTGCACCATC TCGTATGGGA GATTGTAGAT AATAGCATCG ATGAAGCTTT AGCTGGTTAC 
TGTACAGAAA TTAACGTTAC GATTGAAAAA GATAATATCA TTGCGATTAC GGACAACGGC 
CGTGGCATTC CTGTTGATAT TCAAGAGAAA ATGGGGCGCC CTGCTGTCGA AGTCATTATG 
ACCGTGCTTC ATGCAGGAGG AAAGTTTGGC GGCGGCGGTT ATAAAGTGTC GGGCGGACTT 
CATGGCGTCG GCGCTTCTGT CGTTAACGCT CTATCCGAAG AACTGGAAGT ATATGTACAC 
AGGGATGGGA AAATCCATTA TCAAAAATAT CAACGCGGCG TACCTTGTAC GGATTTAGAA 
GTGATTGGAG AAACGGATCG GACAGGTACC ACCGTTCGTT TTAAGCCTGA TCCGGAAATT 
TTTACGGAAA CGACAGAATT TGATTATGAA ACGTTGGCAA CCCGTCTTCG CGAGCTTGCT 
TTCTTAAATC GAGGCCTTAA AATTACGCTT GAAGATAAGC GAGTAGAAAA TCGGAAAAAC 
GAATATCATT ACGAAGGCGG TATTAAATCT TATGTTAAAC ATTTAAACCG GACGCGTGAA 
GTGCTTCATG AGGAACCGAT TTATATCATT GGTGAGCGCG ATGGTATTTA TGTGGAAATT 
GCTCTCCAAT ATAACGATAG TTATAGTAGC AATATTTATT CTTTTGTTAA CAACATTCAC 
ACACATGAAG GCGGAACGCA CGAATCCGGT TTTAAAACAG CATTGACGCG CATTATTAAC 
GATTACGCAC GCAAACATCA AATTTTGAAA GATAATGACC CTAATTTAAC CGGAGAAGAT 
GTTCGCGAAG GATTGACAGC GATCGTTTCG ATTAAACATC CGTCCCCGCA GTTTGAAGGA 
CAAACAAAAA CAAAACTTGG AAACAGTGAT GCACGGGCGG TTACCGATGC AATTTTCTCG 
GAACAATTTG AAACATTTTT ATTAGAAAAT CCAACGATAG CAAGAAAAAT TGTGGAAAAA 
GGCATGATGG CGGCGCGGGC ACGGTTAGCG GCGAAAAAAG CGCGTGAGCT TACAAGACGA 
AAAAGCGCTC TTGAAATTTC TAACTTGCCT GGGAAACTAG CGGATTGTTC CTCGAAAGAT 
CCTTCTATCA GTGAATTGTA TGTGGTCGAA GGAGACTCTG CCGGCGGTTC GGCAAAGCAA 
GGGAGAGACC GCCATTTTCA AGCGATTTTG CCGTTGCGCG GGAAAATTAT CAATGTCGAA 
AAAGCGCGGC TTGACAAAAT TTTATCGAAC AATGAAGTTC GCGCTATCAT CACTGCGTTA 
GGTACGGGAA TTGGTGAAGA TTTTGATATT ACGAAAGCGC GTTACCATAA AATCATTATT 
ATGACAGATG CTGATGTCGA TGGGGCACAT ATCCGCACAT TATTGCTTAC TTTCTTTTAT 
CGTTATATGC GCGAATTTAT CGAGCGGGGA TATGTATACA TCGCCCAGCC TCCGCTTTAT 
AAGATTGAAC AAGGCAAACA GGTAAAATAC GCATATAATG ACCGGCAGCT TGAAAAAATT 
CTTGCGGAAT TGCCGGAAAA TCCGAAACCG ACGATTCAAC GTTATAAAGG TCTTGGAGAA 
ATGAATCCGG AACAATTATG GGAAACAACG ATGAATCCAG AGACAAGAAC GCTTCTTCAA 
GTTAGTTTGC AAGATGCGAT TGAAGCAGAC GAAACATTCG AGATTTTAAT GGGAGACAAA 
GTAGAACCGA GAAGGCAGTT TATTGAAGAA AATGCGCGAT ATGTGAAAAA CTTAGACATT 
TAA 

 

Protein sequence

MTMEQKIEHT YDASQIQVLE GLEAVRKRPG MYIGSTGPKG LHHLVWEIVD NSIDEALAGY 
CTEINVTIEK DNIIAITDNG RGIPVDIQEK MGRPAVEVIM TVLHAGGKFG GGGYKVSGGL 
HGVGASVVNA LSEELEVYVH RDGKIHYQKY QRGVPCTDLE VIGETDRTGT TVRFKPDPEI 
FTETTEFDYE TLATRLRELA FLNRGLKITL EDKRVENRKN EYHYEGGIKS YVKHLNRTRE 
VLHEEPIYII GERDGIYVEI ALQYNDSYSS NIYSFVNNIH THEGGTHESG FKTALTRIIN 
DYARKHQILK DNDPNLTGED VREGLTAIVS IKHPSPQFEG QTKTKLGNSD ARAVTDAIFS 
EQFETFLLEN PTIARKIVEK GMMAARARLA AKKARELTRR KSALEISNLP GKLADCSSKD 
PSISELYVVE GDSAGGSAKQ GRDRHFQAIL PLRGKIINVE KARLDKILSN NEVRAIITAL 
GTGIGEDFDI TKARYHKIII MTDADVDGAH IRTLLLTFFY RYMREFIERG YVYIAQPPLY 
KIEQGKQVKY AYNDRQLEKI LAELPENPKP TIQRYKGLGE MNPEQLWETT MNPETRTLLQ 
VSLQDAIEAD ETFEILMGDK VEPRRQFIEE NARYVKNLDI