Gene Vapar_6281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_6281 
Symbol 
ID7975497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand
Start bp1018137 
End bp1018871 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content69% 
IMG OID644796851 
ProductNUDIX hydrolase 
Protein accessionYP_002948110 
Protein GI239820925 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.60196e-07 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGCCAT CCCCCAACAA GCAGGCCGGC CTGAACTTTC CCAGGCCGCT GGTCACAGTC 
GACGTGGTCA TCTTCACCGT GCTGGAAGAT GCGCTGAAGG TCATGCTGGT ACGTCGCCCG
AGCAACCCTG ACGATCCCTT TCCGGGGCGC TGGGCGCTTC CCGGTGGGTT CATCGACGTC
GACAGAGACG CCAGCCTGCT CGACTGCGCA CGGCGCAAGC TGCGCGAGAA GACCGGGGTT
GCCGCACCGT ATCTCGAGCA GCTGGGCAGT TGGGGTGGCG CGCACCGCGA TCCGCGCGGC
TGGTCGGCCA CGCACGCCTT CTTCGCGTTG ATGCCGGCCC GGGACCTGGT GCCCGACCAA
GGCGTGAACG CCGCGCAGGT CGAATGGATG GACGCGGCTG CCGCGGGTCG CAAGCGCCTG
GCGTTCGACC ATGCGGAGAT CCTGGCCAGC GCCATCGCGC GGCTGCGCAG CAAGGTGGAA
TACACCTCGC TGCCGGCCTT CCTGCTGAAC GAGCCCTTCA CGCTGCCGCA GCTGCAGCAC
ACCTACGAGG TCGTGCTCGG CCGCGCCGTC GACAAGAGCG CCTTCCGCAA GCGGATGCTC
GATGGCGGCT TCATGGAAGA GGCCGGGATG GTGGAGGGCG CCTCCGGCCG GCCGGCCATG
GGTTACCGGC TGCGCGACCG GTCCCAGGCG GCGCTGTTTC CCCGCACCTT CAGCCCGCGC
GACGCCGAGG CTTGA
 
Protein sequence
MKPSPNKQAG LNFPRPLVTV DVVIFTVLED ALKVMLVRRP SNPDDPFPGR WALPGGFIDV 
DRDASLLDCA RRKLREKTGV AAPYLEQLGS WGGAHRDPRG WSATHAFFAL MPARDLVPDQ
GVNAAQVEWM DAAAAGRKRL AFDHAEILAS AIARLRSKVE YTSLPAFLLN EPFTLPQLQH
TYEVVLGRAV DKSAFRKRML DGGFMEEAGM VEGASGRPAM GYRLRDRSQA ALFPRTFSPR
DAEA