| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5887 |
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| Symbol | |
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| ID | 7975938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 599026 |
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| End bp | 599982 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796463 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947737 |
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| Protein GI | 239820552 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.947907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATGA TCAAGACCCT CGGCCTGCTG GCCATCGCCT GCCTGGCGGC ATCAGCGGCG
GCGCAAACCT GGCCTACCAA GCCCATCCGC CTCATCGTGC CCTATGCGGC CGGCGGGCCG
ACCGACGGCA TGGGTCGCAA CATCGCCGCC CGGCTGTCGC TGCGGTTGGG CCAGCCGGTG
GTGGTGGATA ACCGGCCCGG CGCGGGGGGC GTGATCGGCG TGGACGCGGT CGTGAAAGCG
GCGCCGGACG GCTACACGCT GGGCATGATC GCACCCGGTC CGGTGGCCGG GATGCCGGCG
CTGACTAAGG TGCCCTACAC CCATGCGGAC ATCGACTACA TCACGCTGGT GGCCCGCAGC
ACGGCCGTCA TCGTGGGCCC TGCCAATTCC CACGCCAGCC TCAAGGAGCT GATCGACGCG
GCCAAGCGCG CACCCGGCAA GCTGAACTAC GGCTCCGCCG GCAACGGCAC GTCGCCGCAC
ATCGGCGGGG AGATGTTCAA GCAGGAAGCG GGTATCGACG TGACCCACGT GCCTTATCGC
GGCAGCGGAC CGGCCGTCAC GGCGGTGCTG GCTGGCGAGA TCCAGTTCAC GCTCATCGAC
GTGGTGGGCG CGCTGCCGTT GGCGCAATCG GGCCGGCTGC GCATGCTGGC CACGGCGAGC
AGCCAGCGTG TGCCGCAGAC CCCCGACGTG CCCAGCACCG CCGAGCTGGG TCTGCCCAAA
GTGCTGATGG ACACCAACTA CGGAATCATC GCGCCTAGGG GCTTGCCCGC CGCGGTGCAC
CAGAAGATCC GCGAGGCCAC GGTCGCGGTG GTGAACTCGC CGGAGATACA GGCTTCCTTC
AAGCAGCAAG GCGTGTTGCC GGTCACCACC ACCTCCGATG AGTACCGCGC GCTGATGCTC
GCCGAGCAGG CGCGCTGGAC CGAGGTCATC GTCAAGGGCA ACCTCAAGCT CGAATAG
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| Protein sequence | MKMIKTLGLL AIACLAASAA AQTWPTKPIR LIVPYAAGGP TDGMGRNIAA RLSLRLGQPV
VVDNRPGAGG VIGVDAVVKA APDGYTLGMI APGPVAGMPA LTKVPYTHAD IDYITLVARS
TAVIVGPANS HASLKELIDA AKRAPGKLNY GSAGNGTSPH IGGEMFKQEA GIDVTHVPYR
GSGPAVTAVL AGEIQFTLID VVGALPLAQS GRLRMLATAS SQRVPQTPDV PSTAELGLPK
VLMDTNYGII APRGLPAAVH QKIREATVAV VNSPEIQASF KQQGVLPVTT TSDEYRALML
AEQARWTEVI VKGNLKLE
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