| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5612 |
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| Symbol | |
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| ID | 7975224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 319261 |
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| End bp | 320094 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644796196 |
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| Product | amidohydrolase 2 |
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| Protein accession | YP_002947470 |
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| Protein GI | 239820285 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCATCG ATTTCCGTCT GCGCCCGCCG ATTAGCGGCT TCCTCAATAC GCTCATGTAC
TCGGCCGGCG AGCGCCGCGA TGGGTTCACG CGAACGGTCG GTTTTGAACC ATCAGAAGCG
GCTCAGAGAA AGTCGATGGC GTCGCTGCTC AAGGAGATGG ACGAAGCGAG GATCGATCGT
GGCGTGGTCG TAGGCCGCCT TGCCGGCGTG CTCGGCAGCG TATCGAACGA TGATGTCCTG
AGGATTGTCA CTGATTACCC TGGCCGCTTC ATCGGCGCCG CATCCATTGA CCCCACCGAT
CGGCGCCGAG CATGCGAGGC AATCACCCAG GCGGTGAAAG ATGGATTCAA GCTGATCAAC
ATCGAGCCCG GATCGTACCC GGTGCCGATG TACGCGGATG ATCGCCGCCT CTATCCGATC
TACGGCCACT GCGAGGACAT CGGCGTTCCT GTCATCATGA TGGTGGGTGG CACCGCAGGC
CCGGACCTCA GCTATTCCGA TCCCATCCGG ACGGACCGTG TCCTCGCGGA CTTCCCCAGG
CTCGATGTCG TAGTTGCCCA CGGCGGATGG CCTTGGGTCA ACGAGATCCT GCACCTGGGA
TTTCGTCGTT CCAACCTTTG GCTCTCTCCC GACATGTATT TTTCGCGAAT GCCAGGATGG
GAAGAGTATG TCAAGGCGGC GGATGGCTTT CTGGCTGAGC GCATGCTGTA CGCCAGCTCG
TTTCCCTTTT GTCCGGTCCT TGGCTACAAG GAGTGGTTCG AGAGGCTGCC AATCAGGGAA
GAAAATCTGC GCAAGGTCAT GGGGGGCAAC GCGCGCCGGC TGCTGGGAAT CTAG
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| Protein sequence | MIIDFRLRPP ISGFLNTLMY SAGERRDGFT RTVGFEPSEA AQRKSMASLL KEMDEARIDR
GVVVGRLAGV LGSVSNDDVL RIVTDYPGRF IGAASIDPTD RRRACEAITQ AVKDGFKLIN
IEPGSYPVPM YADDRRLYPI YGHCEDIGVP VIMMVGGTAG PDLSYSDPIR TDRVLADFPR
LDVVVAHGGW PWVNEILHLG FRRSNLWLSP DMYFSRMPGW EEYVKAADGF LAERMLYASS
FPFCPVLGYK EWFERLPIRE ENLRKVMGGN ARRLLGI
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