| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5576 |
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| Symbol | |
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| ID | 7975188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 283708 |
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| End bp | 284217 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796160 |
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| Product | aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain protein |
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| Protein accession | YP_002947434 |
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| Protein GI | 239820249 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0078] Ornithine carbamoyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000178756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCTTTC CCTTCGAGGA CCACAATTTC TCGGCCTTCC ATGCGCTGTC GCCCCAGGAC
GAGACGGCCT TGCTGAGCCG CGCGCGCCTG CTGCAAGCGG CCTCGCTGCG GGGCGCTCCT
TCGCGGCAGC TCAAGGGCAA GAAGCTCGGC ATTCTCTGCG ACGAAGGCAG CGACGCCAGC
GAGAGCCGGC TGCTGTTCCA GCATGCCGCC GAGGAACTGG GCGCGCATGT GGCGATCATC
CGCCCCGCGC TCTCGAACCT CGGGAACTCC GGCGAAATCG AGCACACCGC GCGCGTGCTC
GGCCGCTTCT ACGACGCGCT CGAGTGCCAG GGCATGGCGC CCGACGTGGT GCGGCAGATC
GGCCGGCATG CGGGCATTCC GGTCTACGAC GGCCTTGCCT GCGCGAGCCA TTCCACCGCC
CGGCTTGCCG CGCTGCTCGA CGAGCGGACC TCGCCCGCGG ACAACCGGCG CTTCCTGCTG
CAGGCGCTGC TGCTGGGCAG CGTCGCCTGA
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| Protein sequence | MLFPFEDHNF SAFHALSPQD ETALLSRARL LQAASLRGAP SRQLKGKKLG ILCDEGSDAS
ESRLLFQHAA EELGAHVAII RPALSNLGNS GEIEHTARVL GRFYDALECQ GMAPDVVRQI
GRHAGIPVYD GLACASHSTA RLAALLDERT SPADNRRFLL QALLLGSVA
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