| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5572 |
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| Symbol | |
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| ID | 7975184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 279176 |
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| End bp | 280198 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644796156 |
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| Product | glycosyl transferase family 2 |
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| Protein accession | YP_002947430 |
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| Protein GI | 239820245 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00642792 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCTCCT CGACCGCTGC CGAACCCGCG TCCGCGTCCA CCGCGGCCCC GCACGCGCAG
AGCGCGACCG GGACGCAGCA ACGCAGCATT TCCTGCGTGA TCCCGTGCTT CAACGAGGCG
GCCAACCTGC GGCAATTGCT GCCCCTGCTC GAAGAAACAC TCTGGGCCAC GGGAATGCGC
TGGGAGATCA TCGTCGTGGA CGATGGCAGC ACCGACGACA CCGCGGCCGT GGCCCAGGCC
TGGTGCGAAC TGACGGGCTT CCGGTGCATC TGCCTGTCGC GCAACTTCGG CAAGGAGGCG
GCGCTCTCGG CCGGCCTGGC GGCCGCTGCA GGCGACGCGG TGGTTGTGCT CGACGGCGAC
CTGCAGCACT CTCCGTCGCT CATCCGCGCC ATGCTGGACC ACTGGAAGGC CGGCGCGGAG
GTGGTCTATG CGGTGCGCCA GGAGCGCAGC GACGAGAGCC GCCTCAAGCA GATCGGCAGC
CGGATCTTCT ACCGGCTTCT GAACGCGTCG GACCGCTTCG CGGTGCCGCA GGATGCGGGC
GATTTCCGGC TGATGGACCG GCGGGTGGTC GATGCGCTGA CCAGCCTGCC CGAGCGCAGC
CGCTTCATGA AGGGCCTGTA TGCATGGGTC GGCTTCCGGG CCGTGGCCAT GCCCTACACG
CCCAGGCCGC GCGCCGCAGG CGCCAGCAGC TTCAATGCGC GGCGGCTGTT CGCCCTGGCC
ATCGACGGGC TCACCGCGTT CACCACCTGG CCGCTGCGCA TGGTCAGCGT GGTGGGGCTG
CTGTTCGCCG TGCCCGCGCT GTCATATGGC GCCTACGTGG TCCTCGACCA CCTGATGTTC
GGCAACCCGG TCTCGGGCTG GAGCACGATC GTGGTCAGCC TGATGTTCTT CATCGGCGTG
CAGATGATCT TCACCGGCAT CGTGGGTGAG TACGTGGCGC GCATCTACGA AGAGGTCAAG
GGCCGGCCGC TCTACGTGGT CCGCCGCGAA AGCGGCGTCG GCCTCGAGGC CGACCAGCCA
TGA
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| Protein sequence | MISSTAAEPA SASTAAPHAQ SATGTQQRSI SCVIPCFNEA ANLRQLLPLL EETLWATGMR
WEIIVVDDGS TDDTAAVAQA WCELTGFRCI CLSRNFGKEA ALSAGLAAAA GDAVVVLDGD
LQHSPSLIRA MLDHWKAGAE VVYAVRQERS DESRLKQIGS RIFYRLLNAS DRFAVPQDAG
DFRLMDRRVV DALTSLPERS RFMKGLYAWV GFRAVAMPYT PRPRAAGASS FNARRLFALA
IDGLTAFTTW PLRMVSVVGL LFAVPALSYG AYVVLDHLMF GNPVSGWSTI VVSLMFFIGV
QMIFTGIVGE YVARIYEEVK GRPLYVVRRE SGVGLEADQP
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