| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5327 |
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| Symbol | |
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| ID | 7975614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 25522 |
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| End bp | 26490 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795921 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947195 |
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| Protein GI | 239820010 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGC TTCGCACGGC GTTGCCGGCG CTTTTCGCAC TCGCCGCGGC GGGGTCTGCT
GCCATGGCAG CAGGCGCAGC CGACTACCCG AACCGCCCTA TCGAGATGGT CGTGCCTTCG
TCGGCCGGCG GCGGCACCGA CGTCATGGCG CGCTTGTTCG CCGAGACGGC CAAGAAGTAC
ATCACACAGC CGATCGTCGT GAGCAACAAG CCGGGGGCCA GCGGCGGCAT CGCCATGGCG
GAGGTCCAGC GCGCCGCGCC GGACGGCTAC AAGGTGGGCG TGCTGATCTC CGAGCTCGCG
ATCATTCCGC ACCTCAACAT GGCGAAGGTC ACGACGGCCG ATTTCATTCC GATCGCCCGC
CTCAACGGCG ATCCGGGCCT GATCGCCGTG AAGGCCGATT CGCCCTTGCA ATCGATCGAC
GATCTGCTCG CACAGGCACG CAAGCAGCCA GGCAGCCTGA CGATGGGCAA TGCCGGCACC
GGAACGATCT GGCATCTCGC GGCCACAGCG GTCGAGGAAA AGACCGGCGT GAAGTTCAAC
CACGTTCCCT ATCAGGGCGC GGCGCCGAGC GTCATGGCGC TGGTCGGCGG TCACGTGGAC
GCCATCACCG TGAGCCCGGC CGAGATCGGC TCCTTCGTCG CGGCCGGCAA GGTCCGGGTG
CTGGTGTCGA TGGCGGCCCG CCGCCTGTCC GCGCCCTACG ACAAGGTGCC CACCTTCAAG
GAGAAAGGCA CCGACCTCGT GCTCGGCACC TGGCGCGGCC TGGGCGTGCC GCTGGGTACG
CCACCCGAGG TCGTGCAGGT CTTGCGCGAA GCCGCGCGCA AGACCGCGGA GGACCCGGCG
TTCCGTGATG CGCTGACGCG CGCCAACCTG CAGCCGGCCT ACATGGACGG CGTGCAGTTC
CAGACCTTTA TGAACAGCCA GTCTGACTAC TTCAAGAAGC TGCTCGGCGG CCTCCACATC
CAGAAGTGA
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| Protein sequence | MKLLRTALPA LFALAAAGSA AMAAGAADYP NRPIEMVVPS SAGGGTDVMA RLFAETAKKY
ITQPIVVSNK PGASGGIAMA EVQRAAPDGY KVGVLISELA IIPHLNMAKV TTADFIPIAR
LNGDPGLIAV KADSPLQSID DLLAQARKQP GSLTMGNAGT GTIWHLAATA VEEKTGVKFN
HVPYQGAAPS VMALVGGHVD AITVSPAEIG SFVAAGKVRV LVSMAARRLS APYDKVPTFK
EKGTDLVLGT WRGLGVPLGT PPEVVQVLRE AARKTAEDPA FRDALTRANL QPAYMDGVQF
QTFMNSQSDY FKKLLGGLHI QK
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