| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5262 |
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| Symbol | |
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| ID | 7972695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5582064 |
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| End bp | 5583458 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644795856 |
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| Product | peptidase M24 |
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| Protein accession | YP_002947130 |
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| Protein GI | 239818220 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0006] Xaa-Pro aminopeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCAG AAGACAACCG GATCTACGCC GAGCGCCGCG CGCGCCTCGC CTCGCAACTG
GGCAAGGACG GCATCGCCAT CGTCCCGACC GCGCCCGAGC GCCAGCGCAA CCGCGACAGC
GACTTCCTGT TCCGGCACGA CAGCTACTTC TACTACCTGA CCGGCTTCAC CGAACCCAAC
GCCTGGCTGG TGCTCGCGGG CGACGGCCGC AGCATGCTGT TCTGCGCGCC CAAGGACCTG
GGGCGCGAGA TCTGGGACGG CTATCGCCTG GGCCCCGACG CGGCACCCGC GGCGCTTGGC
GTGGACGAGG CCTTCTCGGT CGGCGAGCTC GACGCCCGGC TGCCGAAGCT GCTCGAGAAC
AAGTCGACCG TGTGGTTTCC GTTCGCGATC CACAAGGGCC TTGAAACCCG CGTCGACGGC
TGGCTGCAAT CGGTGCGCGC GCGCGTGCGC TACGGCGCGC TCTGCCCCGA GGAACTGCAC
GACCTGTGCG GCCCGCTCGA CGAAATGCGC CTGGTGAAGG ACGCCCACGA GCAGGGCATC
ATGCGGCGCG CCGCGCAGAT CAGCGCGCGC GCCCACGTCC GCGCGATGCA GCTGTCGGCG
CGCATGCTGC GTGAAGGCAA GGACGTGCGC GAGTACCACC TCGACGCCGA GCTGCTGCAC
GAGTTCCGCC TGGGCGGCTC GCAGTACCCG GCCTACGGCT CCATCGTGGC CGCGGGCGCC
AATGCCTGCG TGCTGCACTA CCGCGCCGAC GCAGCGCCGG TGCGCAGCGG CGAGCTGGTG
CTGATCGACG CGGGCTGCGA GCTCGACGGC TACGCCAGCG ACATCACCCG CACCTTCCCC
GCCAACGGCA AGTTCAGCGG CCCGCAGCGC GCGCTGTACG ACCTGGTGCT GGCCAGCCAG
GATGCCTCGG CCGCGGCCAC CAGGGCCGGC AACCGCTTCA ACGATCCGCA CGATGCGGCC
GTCAAGGTGC TGGCGCAGGG CATGCTCGAC CTGGGCCTGC TCGATGCCGG CAAGGTGGGC
AGCGTCGACG ACGTGATCGA CACGCGCGCC TACTTCCAGT TCTACATGCA CCGCACCGGC
CACTGGCTCG GCATGGACGT GCACGACTGC GGCAGCTACG TGGAGCCCAC GCAGGTCGGC
GAGGTGAGCG AGCGCAAGGA CCCGCTGTCC AACGAAGTCA TCAAGAACCG GCCGAGCCGC
ATCCTGCATC CCGGCATGGT GCTGACGCTG GAGCCCGGCA TCTATGTGCG CCCCGCCGAG
GGCGTGCCCG AGCAGTTCCA CAACATCGGC ATCCGCATCG AGGACGACGC GATCGTCACG
GCCACCGGCT GCGAGCTCAT TTCGCGCGGC GTGCCGGTGA AGGCGGACGA GATCGAGGCA
CTGATGCGAG CTTGA
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| Protein sequence | MTSEDNRIYA ERRARLASQL GKDGIAIVPT APERQRNRDS DFLFRHDSYF YYLTGFTEPN
AWLVLAGDGR SMLFCAPKDL GREIWDGYRL GPDAAPAALG VDEAFSVGEL DARLPKLLEN
KSTVWFPFAI HKGLETRVDG WLQSVRARVR YGALCPEELH DLCGPLDEMR LVKDAHEQGI
MRRAAQISAR AHVRAMQLSA RMLREGKDVR EYHLDAELLH EFRLGGSQYP AYGSIVAAGA
NACVLHYRAD AAPVRSGELV LIDAGCELDG YASDITRTFP ANGKFSGPQR ALYDLVLASQ
DASAAATRAG NRFNDPHDAA VKVLAQGMLD LGLLDAGKVG SVDDVIDTRA YFQFYMHRTG
HWLGMDVHDC GSYVEPTQVG EVSERKDPLS NEVIKNRPSR ILHPGMVLTL EPGIYVRPAE
GVPEQFHNIG IRIEDDAIVT ATGCELISRG VPVKADEIEA LMRA
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