Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5127 |
Symbol | |
ID | 7971498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 5441611 |
End bp | 5442315 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644795721 |
Product | cytochrome c oxidase subunit III |
Protein accession | YP_002946995 |
Protein GI | 239818085 |
COG category | [C] Energy production and conversion |
COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCACA CCGCAACCGC CGCTGCTGCG CCGCTGAACC CGCAGGCCAT CGCCGCCACC GGCTGGCGCG GGCTGGTCGC CGACTGGTCC TCCGACCGCC AGGCGTTCCA CGTCTCGTGG GGCAAGGCGA TGATGTGGAT CTTCCTGCTC AGCGACACCT TCGTCTTCAG CTGCTTCCTG ACCGGCTACA TGACGGTGCG CGCCTCGACC ACCGTGCCGT GGCCCAACCC GAGCGAGGTG TTCGCGCTCC ATGTGGGGGG CGCCGACATC CCGCTGCTGC TGATCGCGAT CATGACCTTC GTGCTCATCA GCAGCAGCGG CACGATGGCG ATGGCCGTCA ATTTCGCCTA CCGCCGCGAC CGCGTGAACG CCGCCACGCT GATGCTCGTG ACCGCGACCT GCGGCGAAAT CTTCGTCGGC ATGCAGGCCT TCGAGTGGTC CAAGCTGATC CTCGAGGAGG GCGTGCGGCC CTGGGGCAAC CCAATGGGCG CGGCGCAGTT CGGCTCGGCC TTCTTCATGA TCACGGGCTT CCATGGGCTG CACGTGTCGG CCGGCGTGGT CTTCCTGTTC ACCGTGGCCT TCAAGCTGAT GCGCGGCGAC TACGACAAGT CCGGCAACTA CCAGATCGTC GAGATTGCCG GCCTGTACTG GCACTTCGTG GACCTGGTGT GGGTGTTCAT CTTTGCGCTG TTCTATCTCT GGTGA
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Protein sequence | MNHTATAAAA PLNPQAIAAT GWRGLVADWS SDRQAFHVSW GKAMMWIFLL SDTFVFSCFL TGYMTVRAST TVPWPNPSEV FALHVGGADI PLLLIAIMTF VLISSSGTMA MAVNFAYRRD RVNAATLMLV TATCGEIFVG MQAFEWSKLI LEEGVRPWGN PMGAAQFGSA FFMITGFHGL HVSAGVVFLF TVAFKLMRGD YDKSGNYQIV EIAGLYWHFV DLVWVFIFAL FYLW
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