| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5115 |
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| Symbol | |
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| ID | 7971486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5425808 |
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| End bp | 5426956 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644795709 |
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| Product | DNA protecting protein DprA |
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| Protein accession | YP_002946983 |
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| Protein GI | 239818073 |
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| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
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| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.770654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGACCGAG CAGAACTCGC AGGCTGGCTG CGGCTTTCAC TGACGCCGGG CATCGGCGAT
GGCGCCGCGC GCCGGCTGCT GGCGGCTTTC GGCCTGCCCG AGAAAGTCTT TGCGCAGACC
GGCGAGGCGC TGCGCCAGGT GGTGTCGGCG GCGCAGGCCG ACGCGCTGCA CCAGCCGCCG
CCGGGCCTGC AGGCCCAGCT CGACCAAACC TGGCAGTGGC TGCAGCCCGG CCACGATGAC
GGCGCTGCGC GCCGCCTGGT CACGCTGGGC GATGCCGCCT ACCCCGCCTC GCTGCTCGAG
ATGGCCGACC CGCCGCTGAT GCTCTACGTG CTCGGCGCCG CGGACTTCGA CCTGACCCAG
CTCGGCCACA GCATTGCGGT GGTGGGCAGC CGCAATCCCA CGCCGCAGGG CGCCGCCAAC
GCCCGCGCCT TTGCGCGCGC GCTGGGCGAC GCGGGCCTGC CGGTGGTGTC GGGCCTCGCG
CTCGGCGTCG ATGGCGCCGC GCACCAGGGC GCGCTCGATG CGGCCGGCGA CATGCCGCGG
CTGGCCACGG TGGCCGTGGT GGGCACCGGC CTGGACCGCG TCTATCCGGC GCGGCACCGC
GACCTCGCAC ACCGCATCAC GCTGCAGGGC CTGATCGTGA GCGAGCTGCC GCTCGGCACG
CCGCCGCTCA CGCAGAACTT TCCCAAGCGC AACCGCCTCA TCGCCGGCCT GGCGCGCGGC
ACGCTGGTGG TCGAGGCCGC GCTCGCCTCG GGCTCGCTGA TCACCGCGCG GCTCACCTCG
GAGCAGGGCA AGGAAGTGTT CGCCATTCCG GGCTCGATCC ATTCGCCGCA GTCGCGCGGC
TGCCATGCGC TGATCCGCCA GGGCGCGAAG CTGGTCGAAT CGGTCAACGA CATCCTCGAG
GAGCTGCCGT CCCTGCACAC GGGCAGCGCG GCAGCGCCGG CCTCCGCGAA CGGGAACGCC
GGCGGCGCAC CCGCTTCCGA AGAGCCCTTG CTGGACGCAC TCGGCTTCGA TCCCGTGAGC
CTGGACGCGC TGAGCGCGCG CACCGGCTGG AGCGCCGCCG CGCTGCAGGC CCGGCTGCTC
GAACTCGAGC TCGACGGCCA CGTCGCGCGG CTGCCCGGCG GCCTGTTCCA GAGAGCGGCC
ATCGGCTGA
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| Protein sequence | MDRAELAGWL RLSLTPGIGD GAARRLLAAF GLPEKVFAQT GEALRQVVSA AQADALHQPP
PGLQAQLDQT WQWLQPGHDD GAARRLVTLG DAAYPASLLE MADPPLMLYV LGAADFDLTQ
LGHSIAVVGS RNPTPQGAAN ARAFARALGD AGLPVVSGLA LGVDGAAHQG ALDAAGDMPR
LATVAVVGTG LDRVYPARHR DLAHRITLQG LIVSELPLGT PPLTQNFPKR NRLIAGLARG
TLVVEAALAS GSLITARLTS EQGKEVFAIP GSIHSPQSRG CHALIRQGAK LVESVNDILE
ELPSLHTGSA AAPASANGNA GGAPASEEPL LDALGFDPVS LDALSARTGW SAAALQARLL
ELELDGHVAR LPGGLFQRAA IG
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