| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5090 |
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| Symbol | |
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| ID | 7971461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5402244 |
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| End bp | 5403827 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795684 |
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| Product | hypothetical protein |
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| Protein accession | YP_002946958 |
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| Protein GI | 239818048 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAAGC CGCAACGACA ACTCCCCACT CCGCTGCACA AGGTTGCGGC TCTGGCCGGC
GCCACGCTGC TGCTGGCGGC CTGCGGCGGT GGTGGAGGAG GTGGCGGCAT CGGCATCGGC
TTTCCACCGC CAACCGGCGA CACCGGCCGC GGCTCGGTCG TCACGGATCC GCCCGAGCAG
ACCGCCAAGC TCTCGGCCGA CCAGCTTCGC ACCAACCTCC AGGCGACCGA CCAGGGCAAG
GCCCTGCTGC AGGTGGCGGG CACGCCCAGG TGCGGGGTCG AGGTGCGCTA CCTCGAATAC
CGCACCATCG GCGGCAAGAA CGAGGCGACC AACGCCACCG CCGCGATCAT GCTGCCCTCC
GGTACCGACG TGGCCTGCAA CGGGCCGCAT CCCGTGGTGC TCTATGCGCA CGGCACCACG
GCCGCGCGCA ACTACAACCT CGCCAAATGG ACCGACTCCA CCCAGCCGGC CGCCGGCGAG
GGCCTGACGA TCGCCGCCAT GTTCGCGGCG CAGGGCTACA TCGTGGTGGC GCCCAACTAT
GCGGGCTACG ACAAGTCGAC GCTGGCCTAC CACCCGTACC TCGACGGCGA CCAGCAGGGC
AAGGACATGG TGGACGCGCT CACCGCGGCG CGCAAGACTT TCACGGGCAT CGACGCCACC
GACGCGGGCT CGCTGCTGAT CACCGGCTAT TCGCAGGGCG GCTACGTGGC GCTGGCAGCA
CACCGCGAGA TGCAGGCCAC GGGCCGGGCG GTGACGGCGT CGGCACCGCT CTCCGCGCCT
TCGGCCATCG GGCTGCTGGC GGACTACACC TTCATGGGCT GGCCGGCGCT CGGCAGCACG
CTCTTCGTGC CGCTGCTCTC GGCCAGCTGG CAGCAGCAGT TCGGCGATGT CTACGGCAGC
ACCAGCGACA TCTACGAGTC GCAGTACGCC ACCGGCATCG ACACCCTGCT GCCGAGCCTC
ACGCCCATCA CCACGCTGTA TGCCAACGGC AAGCTGCCGC AGCTCGCGCT CTTCCCCGCG
GGTGCGACGC CGGGCCCGGT GAGCCCGGAG CTGTCGATCT TCTACGGCGC CAACAACCTC
ATCCGCCAGA GCTACCTGAC GCAGGCGGCC GGCGACATCC AGGCGAACCC CTGCCCCGGC
AATGCGCTGC CCGCCACGGC GGCCTCGCTG AGCACCACCT CGCCGCTCGA TTGCAGGCCG
GCCGTGGGCT TTCGCAAGGC GGCGCGCGCC AACGACCTGC GCACCTGGCT GCCGACGCGG
CCGGTGCTCA TGTGCGGCGG CGCCAACGAT CCGACCGTGA ACTTCCTGAG CACCCGCGCC
ACCGCCGGCT ACTTCCGCGC CCGCGGCATG CCTGCCGCCG CGCTGACGGT GGTCGACCTG
GAGGATTCCG GCACCACCGA CTCGTACTCC GCCGCGCGCG CCGGCTTCGC GCAGGCCAAG
AGCACCCTCG CGCAGAACAC CCCCGGCAGC GACGCCGACA AGCGGCAGGC CGTCACCCTG
GCCTACCACG GCAGCCTGGT GCCGCCGTTC TGCCTGGCTT CGGCGCGCGG CTTCTTCCAG
GGCGTACTGG CCGCCGGCGG CTAG
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| Protein sequence | MKKPQRQLPT PLHKVAALAG ATLLLAACGG GGGGGGIGIG FPPPTGDTGR GSVVTDPPEQ
TAKLSADQLR TNLQATDQGK ALLQVAGTPR CGVEVRYLEY RTIGGKNEAT NATAAIMLPS
GTDVACNGPH PVVLYAHGTT AARNYNLAKW TDSTQPAAGE GLTIAAMFAA QGYIVVAPNY
AGYDKSTLAY HPYLDGDQQG KDMVDALTAA RKTFTGIDAT DAGSLLITGY SQGGYVALAA
HREMQATGRA VTASAPLSAP SAIGLLADYT FMGWPALGST LFVPLLSASW QQQFGDVYGS
TSDIYESQYA TGIDTLLPSL TPITTLYANG KLPQLALFPA GATPGPVSPE LSIFYGANNL
IRQSYLTQAA GDIQANPCPG NALPATAASL STTSPLDCRP AVGFRKAARA NDLRTWLPTR
PVLMCGGAND PTVNFLSTRA TAGYFRARGM PAAALTVVDL EDSGTTDSYS AARAGFAQAK
STLAQNTPGS DADKRQAVTL AYHGSLVPPF CLASARGFFQ GVLAAGG
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