| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5010 |
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| Symbol | |
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| ID | 7974128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5323323 |
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| End bp | 5324654 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644795604 |
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| Product | hypothetical protein |
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| Protein accession | YP_002946879 |
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| Protein GI | 239817969 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTGA AATCGCTCGC TCTGACCGCC GCCCTGGTGG CCAGCACCCT CGGCGCGCTG
CTTGCGCCAT CGCTCGCCCA GGCGCAGGCC AAGGAACAGT TCTTTCCGCT GCTGGTGTAC
CGCACCGGCC CCTATGCGCC CAACGGCACG CCCTGGGCCA ATGGCAAGCA GGACTACATC
AAGTACATCA ACGCCACCGG CGGCATCAAC GGCGTGAAGA TCACGTACGA AGAGTGCGAG
ACCGGCTACG CCACCGACAA GGGCGTGGAG TGCTACGAAC GCCTGAAGGG CCGCCCCGGC
GTGACGCTGT TCGACCCGCA GGCCACCGGC ATCACCTTTG CGCTGACCGA CAAGGTGCCC
ACCGACAAGA TCCCGCTCAT CACGCTGGGC TACGGGCTGT CGGCGTCGCA GGACGGCAGC
GTGTTCAAGT GGAACTTCCC GCTGATGGGC AGCTACTGGA CCGCGGCCGA CATCCTGATC
CAGCACATCG GCAAGAAGGA AGGCGGCATG GACAAGCTCA AGGGCAAGAA GATCGCCCTC
GTGTACCACG ACTCGCCGTT CGGCAAGGAG CCGATCCCGC TGCTGCAGGA GCGCGCCAAG
CAGAACGGCT TCGAGCTGTC GCTGATTCCG GTCACCGCAC CCGGCGTGGA GCAGAAGTCC
GCCTGGCTGC AGGTGCGCCA GTCGCGGCCC GACTACGTGC TCTTGTGGGG CTGGGGCGTG
ATGAACTCCA CCGCGCTGAA GGAGGCCGTG GCCACCGGCT ACCCACGCGA GAAGATGTAT
GGCGTGTGGT GGGCCGGCGC CGAGCCTGAC GTGAAGGACG TGGGCGCCAA CGCCAAGGGC
TACAACGCGC TGGCGCTCAA CACCTCGGGC ACCGAGCCGA AGGTGATCCA GGAAATCCTC
AAGCAGGTCC ACGACAAGGG CCAGGGCACG GGGCCGAAGG ACGAAGTGGG CTCGGTGCTC
TACACCCGCG GCGTGATCAT CCAGATGCTG GGCGTCGAAG CCGTGAAGCG CGCGCAGGAG
CGCTTCGGCA AGGGCAAGGT CATGACCGGC GAGCAGGTGC GCTGGGGCAT GGAGAACCTC
GCGCTCGACC AGAAGAAGCT CGATTCGCTG GGCTTCTCGG GCGTACTGCG CCCGCTCGGC
ACCTCGTGCC AGGACCACAT GGGCTCGACC TGGGCCCGCG TGCACACCTG GGACGGCGCC
AAGTGGGGCG GCATGTCCGA CTGGTACCAG GCCGACGAGC AGATCATCAA GCCGATGGTG
AAGGTGGCGG CCGAGAAGTA CGCGGGCGAA AAGAAGCTCA CGCGCCGCGA CGCAGCCGAT
TGCAGCATGT GA
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| Protein sequence | MKLKSLALTA ALVASTLGAL LAPSLAQAQA KEQFFPLLVY RTGPYAPNGT PWANGKQDYI
KYINATGGIN GVKITYEECE TGYATDKGVE CYERLKGRPG VTLFDPQATG ITFALTDKVP
TDKIPLITLG YGLSASQDGS VFKWNFPLMG SYWTAADILI QHIGKKEGGM DKLKGKKIAL
VYHDSPFGKE PIPLLQERAK QNGFELSLIP VTAPGVEQKS AWLQVRQSRP DYVLLWGWGV
MNSTALKEAV ATGYPREKMY GVWWAGAEPD VKDVGANAKG YNALALNTSG TEPKVIQEIL
KQVHDKGQGT GPKDEVGSVL YTRGVIIQML GVEAVKRAQE RFGKGKVMTG EQVRWGMENL
ALDQKKLDSL GFSGVLRPLG TSCQDHMGST WARVHTWDGA KWGGMSDWYQ ADEQIIKPMV
KVAAEKYAGE KKLTRRDAAD CSM
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