| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4969 |
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| Symbol | |
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| ID | 7974251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5279940 |
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| End bp | 5280974 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795564 |
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| Product | serine/threonine protein kinase |
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| Protein accession | YP_002946839 |
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| Protein GI | 239817929 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.39846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTTT CCCCCGCAGC GCCCGCGAAT ACCCATCCTT ACGAGAGCCT CACGCCCGAC
GTGGTGCTCG ACGCCCTGGC GACGCTCGGC CTGCACGGCG ACGGCCGGCT CACGGGCCTG
AACTCCTATG AGAACCGGGT CTACCAGGTC TACCTGGAAG ACCGCAGTGC CGTGGTCGTC
AAGTTCTACC GCCCCGAGCG CTGGAGCGAA GCCGAGATCC TCGAGGAGCA CGGCTTCTCG
CTCGAACTGG CGGCGGCCGA AGTGCCCGCC GTGGCGCCGC TGGCCTTCGA CGGCAGCACG
CTGCACCGCC ACGGCGGCTT CGCCTTCAGC GTGAGCCCCT ACCGCGGCGG CCGCGCGCCG
GAGCTCGACG ATTTCGAGGT GCTCGAGTGG GTCGGCCGCT TTCTCGCGCG CATCCACACC
GTGGGCAGCG CCAGGCCCTT CGAGGCCCGG CCCGCGCTCG ACCTGCAGAC CTTCGGCATC
GCCTCGCGCG ACTGGCTGCT GGCCAACGAC AAGGTGCCGC TCGACGTGCA GCGCGACTGG
GAAAAGGCCT GCAACGAAGC ACTGGACATG ATTGCCGCCA CGGCGCTGGC GGTGAACGCC
CCGGCCTCCG ACTTCAAGCC GCGCAAGCTG CGCCTGCACG GCGACGTGCA TCCCGGCAAC
ATCCTGTGGA CCCCGACCGA CCGGCCCGGC GGCGGCCCGC ACTTCGTCGA CCTGGACGAT
GCGCGCACCG GCTTCGCGGT GCAGGACTTG TGGATGCTGC TGTCGGGCGA ACGTGCGCAG
CGCACCTCGC AGCTCTCGGG GCTGCTCGAC GGCTACGAGC AGTTCCGCGA ATTCGACCGC
CGCGAACTCG CGCTGATCGA GCCGCTGCGC ACCCTGCGGC TCATCCACTA CAGCGCCTGG
CTCGCGCGGC GCTGGGAAGA CCCGATCTTC CCGATCAACT TTCCGTGGTT CGGCTCCAGC
GACTACTGGA AGGGCCAGAT CCTCGTGCTG CAGGAGCAAT GCGAGCAGAT GGCCGAAGAG
CCGCTCTACG CTTAG
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| Protein sequence | MTLSPAAPAN THPYESLTPD VVLDALATLG LHGDGRLTGL NSYENRVYQV YLEDRSAVVV
KFYRPERWSE AEILEEHGFS LELAAAEVPA VAPLAFDGST LHRHGGFAFS VSPYRGGRAP
ELDDFEVLEW VGRFLARIHT VGSARPFEAR PALDLQTFGI ASRDWLLAND KVPLDVQRDW
EKACNEALDM IAATALAVNA PASDFKPRKL RLHGDVHPGN ILWTPTDRPG GGPHFVDLDD
ARTGFAVQDL WMLLSGERAQ RTSQLSGLLD GYEQFREFDR RELALIEPLR TLRLIHYSAW
LARRWEDPIF PINFPWFGSS DYWKGQILVL QEQCEQMAEE PLYA
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