Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4821 |
Symbol | |
ID | 7970291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 5139088 |
End bp | 5140080 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644795416 |
Product | hypothetical protein |
Protein accession | YP_002946692 |
Protein GI | 239817782 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGCTCGT ATTCCGCACC CCGCCGGCAT TGGCTGGCAT TCGCCGCCGC CCTCGCCTGC AGCGCCGCGC TGCCCCTGCA GGCGCAGCCC GCCACCCCCT GGCCGTCCAA GCCCGTGAAG CTCGTGGTCG GCTATGCCGC CGGCGGCGCC ACCGACGTGA TCGCGCGCCT CGTCGCCATC AAGCTGGGCG AGCAGCTCGG CCAGCCCCTG CTGGTGGACA ACCGAACGGG CGCCAACAGC AACGTGGGCG CCGAGTACGT GGCCCGCGCG CCCGCCGACG GCTACACGCT CTACGTCTAC ACCATCGCGA ACACCATCAA TGCCTCACTC TACGGCAAGC TCGGCTACGA CCCGGTCAAG GACTTCGAGC CCGTCGGCCT GATCGCCAAG ATTCCCAACA TCCTCGTGGT GAACCCGTCG TTGCCCGTGA AGAACGTGGC CGAATACGTG CGCTTTGCCA AGGAGTCGAA AGAGGGCATC ACCTTCGCGT CGTCCGGCAG CGGCTCGTCC ATCCACCTGT CGGGCGAGAT GTTCAAGATG CAGGCCGGGC TCAACATGCT GCACGTGCCC TACCGCGGCA GCGCGCCCGC CATCACCGAC CTGCTGGGCG GCCAGGTGCA GTCGATGTTC GACAACACGC CGTCGGCCCT GCCGCACGTG CAGGGCGGGC GCCTGCGCGC CATTGCCATC ACCAGCGCCC GGCGTTCGCC GCTGCTGCCC GACGTGCCCA CGCTGGCCGA GTCGGGCTAT CCGGGCTTCG ACGTGCAGTC GTGGTTCGGC TTGGCGGCCC CCGCGGGCAC ACCGCGCGCC GTGATCGACC GCCTGAATAC TGCGCTCGGC AAGGTGCTGG CCGCGCCCGA TGTGCGCCAG CGCCTGCAGG AGCTGGCCGC CACCCCCGAA CCCGGCACGC CCGAGCAGAT GCGCAGCTTT GCCGCGGCCG AGATCAAGCG CTGGCGCGAC GTCGTGAAGG CATCCGGCGC CAAGGCCGAC TGA
|
Protein sequence | MSSYSAPRRH WLAFAAALAC SAALPLQAQP ATPWPSKPVK LVVGYAAGGA TDVIARLVAI KLGEQLGQPL LVDNRTGANS NVGAEYVARA PADGYTLYVY TIANTINASL YGKLGYDPVK DFEPVGLIAK IPNILVVNPS LPVKNVAEYV RFAKESKEGI TFASSGSGSS IHLSGEMFKM QAGLNMLHVP YRGSAPAITD LLGGQVQSMF DNTPSALPHV QGGRLRAIAI TSARRSPLLP DVPTLAESGY PGFDVQSWFG LAAPAGTPRA VIDRLNTALG KVLAAPDVRQ RLQELAATPE PGTPEQMRSF AAAEIKRWRD VVKASGAKAD
|
| |