Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4432 |
Symbol | |
ID | 7974106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 4672356 |
End bp | 4673330 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644795021 |
Product | hypothetical protein |
Protein accession | YP_002946309 |
Protein GI | 239817399 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.65696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCGCG CCCGTCGCGG CCTGCTGCTG GGGCTGCTGG CGGCGGCGGG GCTGCCTGCG CACGCGCAGA GCGAGGCCCG GCCGATCCGC ATCGTCGTGC CCTTTGCGGC CGGCGGCGGC AACGACGTGT TCGCGCGCCA GATGGCCAAG GGCCTGGGCG AGCTGCGCAA GCAGGGCGTC ATCGTCGACA ACAAGCCCGG CGCGGGCGGC AACCTCGGCA CCGAGCAGGT GGTGCGCAGC GCGCCCGACG GCAGCACGCT GCTGCTGGGC CACACCGGCA CCGTGTCGAT CAACCCGGCG CTCTACAAGG GCCTGAAGTT CGACGCGCGC AAGGACCTGC TGCCCGTGGC CATGTTCGCT TCGTCCGCAC TGGTGCTCGT GGTGCCCGCG GCATCGAAGG TGCGCACCGT GGCCGATCTG GTCGCCGAGG CCAAGGCGCG GCCGGGCCTG CTCGACTACG CATCGAGCGG CAGCGGCACC GGCGGCCACC TGACCGGCGA GCTCTTTGCA GAGCGCACCG GCACGCGGAT CAATCACATT CCCTACAAGG GCACCAACCC CGGCCTCACC GACCTGGCGG GCGGGCAGGT GCAGATGATG TTCAGCGTCG TTCCGCCCGC GCTCGCGCTG GTCAAGGGCG GGCGGCTGCG CGCCGTTGCC GTCACCGGCG CCAAGCGCCT GCCTTCGCTG CCCGACGTGC CCACCGTGGC CGAGTCGGGC CTGCGCGAAC TCGCGGGCTT CGAGAGCACG CTGACTTATG GCGTTCTCGC GCCGCGCGGC ACGCCGGATA CCTTCGTGAA GGAGCTCTCG GCGCAGATGC TCCAGGTGGC GGGCAGCGCC GAATTCCAGT CGCGCCTGGG CGTGGAAGGC GCCGTGCCGC TGCTCGGCGG CCCGGCCGAA TACGCCGCCC TCATCGCGAA GGAAAGCGCG CTCTGGGCCG GCATCGTCAA GGCTTCCGGC GCCACGGTCG AGTGA
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Protein sequence | MDRARRGLLL GLLAAAGLPA HAQSEARPIR IVVPFAAGGG NDVFARQMAK GLGELRKQGV IVDNKPGAGG NLGTEQVVRS APDGSTLLLG HTGTVSINPA LYKGLKFDAR KDLLPVAMFA SSALVLVVPA ASKVRTVADL VAEAKARPGL LDYASSGSGT GGHLTGELFA ERTGTRINHI PYKGTNPGLT DLAGGQVQMM FSVVPPALAL VKGGRLRAVA VTGAKRLPSL PDVPTVAESG LRELAGFEST LTYGVLAPRG TPDTFVKELS AQMLQVAGSA EFQSRLGVEG AVPLLGGPAE YAALIAKESA LWAGIVKASG ATVE
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