Gene Vapar_4095 details

Gene Information

• Locus tag: Vapar_4095
• ID: 7974417
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 4339556
• End bp: 4340194
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 644794681
• Product: hypothetical protein
• Protein accession: YP_002945974
• Protein GI: 239817064
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0602] Organic radical activating enzymes

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCTACA GCGTCAAGGA AATCTTCTAC ACCCTGCAGG GCGAAGGTGG ACAGGCCGGC 
ATGCCGGCCG TGTTCTGCCG CTTCGCGGGC TGCAACCTCT GGACCGGCCG CGAGGAAGAC 
CGCGCCACGG CCGTCTGCCG TTTCTGCGAC ACCGATTTCG TCGGCACCGA CGGCACGCTG 
GGCGGCAAGT TCAAGAATGC CGAACTGCTG GCCGACACCA TCGCCGCGCA ATGGCCGGCC 
GAAGACGCCG AGCACCGGCT GGTGGTGCTG ACCGGCGGCG AGCCGCTGCT GCAGGTGGAC 
GCCGCACTGG TCGACGCGCT GCATGCGCGG CGCTTTCGCA TCGCGGTGGA AAGCAACGGC 
ACAGTCGCCG CGCCCGAGGG CATCGACTGG CTCTGCATCA GCCCCAAGGC CGGCGCGCCG 
TGGGTGCAGC AGCGCGGCCA GGAACTCAAG CTGGTGTGGC GGCAGACCGA ATTCGATCTC 
GACACGATGG CTCGCACCGG CGAGTTCACG CACCGCTTCC TGCAGCCGAT GGACGGGCCC 
GACCGCGTGG CCAATACCGA GCTGTGCATT GCCGAATGCA TGCGCCATCC GGCGTGGCGC 
CTCAGCGTGC AGACCCACAA GATCACCGGC ATCCGCTGA 

 

Protein sequence

MTYSVKEIFY TLQGEGGQAG MPAVFCRFAG CNLWTGREED RATAVCRFCD TDFVGTDGTL 
GGKFKNAELL ADTIAAQWPA EDAEHRLVVL TGGEPLLQVD AALVDALHAR RFRIAVESNG 
TVAAPEGIDW LCISPKAGAP WVQQRGQELK LVWRQTEFDL DTMARTGEFT HRFLQPMDGP 
DRVANTELCI AECMRHPAWR LSVQTHKITG IR