| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3832 |
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| Symbol | |
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| ID | 7969689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4052520 |
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| End bp | 4054049 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644794418 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_002945712 |
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| Protein GI | 239816802 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGGCCT CCACCGTTCA TGAGCTGATC GAACTGCAGG CGGCGGCACG GCCGCAGGCG
GTGTATGCGC TGTCCACCGA AGGCGGGCGC AAGAGCATCG GCTTTGGCGA GCTCGCGCGC
GGCTGCCGTA CGGTGGCGGC GGTGCTGCAC GCGCATGGCG CGCGGCCGGG CGACACGGTG
TCGGTGGTCA TGCCCAATGG CCTGCAGACG CTGCGCCTGC TGCTCGGCGC CATGCATGGC
GGCCTGTGCG TGAACCCGGT CAACCTGCTG TCGCAACCCG AGCAGATGCG CTATGTGCTC
GCGCATTCGG ATTGCCGCGT GGTGTGCGTC GCGCCCGAGT GGGAAGCACG CGTGCGCGCG
ATGCTCGATG GCATCGGCCG GCCGGTCGAA GTGCTGGTGG CGAGCCCCGA CGCCGATGCG
CTGCCGGGCG AAGCGCAGGA GGCGCAGGCG GAGCCCCTGC ATGAGGCTGC GCCGCCCGCC
GCCGGCGACG TGGCCCTGCT GATGTACACC TCGGGCACCA CCGGCATGCC CAAGGGCGTG
ATGCTCACGC AAGGCAACCT CGCGGCCAAT GCGCATGCGA TCAGCGCCGA GCACGCGCTG
CAGCCCGCCG ACCGCGTGCT GGCCGTGCTG CCGCTCTATC ACATCAACGC CTTCGCCGTG
ACCATGCTCG CGCCGCTCGC CCACGGCGGC AGCCTCGCGA TGCCGCCGAA GTTCTCGGCC
GGCCGCTTCT GGGAGCAGGC AGCGGGCACG CAGTGCAGCT GGATCAACGT GGTGCCCACC
ATGATCTCGT ACCTGCTCGA AGGCGAGGAG CCGCCGCCCG CGCAGACCAC TGCCATCCGC
TTCTGCCGCT CGGCATCGGC CGCGCTGCCG CCGGAGCACC ACCGCGCCTT CGAGCAGAAG
TTCGGCATCG GCATCGTCGA GACCATGGGC CTCACCGAAA CCGCGGCGCC GTCATTTTCG
AACCCGCTCG ATCCCGCACT GCGCAAGCTC GGCTCGGTGG GCCGCGCCTC GGGCTGCGAG
GCGCGCGTCA TCGATGCCGC GCTGGCCGAG GTGCCCGACG GCAGCACCGG AGAGCTGGCC
ATCCGCGGCC CCAACGTGAT GCGCGGCTAT TACAAGAACG AGGAAGCCAC GCGCGCGAGC
TTCACGCCCG ACGGATGGCT GCGCACCGGC GATCTCGGCC ACCGCGATGC CGATGGCTTC
TTCTTCGTGA CCGGCCGCAT CAAGGAGCTG ATCATCAAGG GCGGCGAGAA CATCGCGCCG
CGCGAGATCG ACGAGGCGCT GCTGCGGCAT CCTGCCGTGC TCGAGGCCGC GGCGGTGGGC
GTGCCCGACC GCCACTACGG CCAGGAGATC GGCGTGTGCA TCGTGCTGCG CGACGGCTGC
GCCTGCACCG AAGACGAGCT GCGCGCCTTC AGCACCGAGG CGCTCGGCCG CTACAAGGCG
CCGGGCCACT ACCGCTTTGT CACGGACCTG CCGCGCGGGC CTTCGGGAAA GGTGCAACGG
CTGAAGCTGC TGCCGCTGTT CGAGAGATGA
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| Protein sequence | MAASTVHELI ELQAAARPQA VYALSTEGGR KSIGFGELAR GCRTVAAVLH AHGARPGDTV
SVVMPNGLQT LRLLLGAMHG GLCVNPVNLL SQPEQMRYVL AHSDCRVVCV APEWEARVRA
MLDGIGRPVE VLVASPDADA LPGEAQEAQA EPLHEAAPPA AGDVALLMYT SGTTGMPKGV
MLTQGNLAAN AHAISAEHAL QPADRVLAVL PLYHINAFAV TMLAPLAHGG SLAMPPKFSA
GRFWEQAAGT QCSWINVVPT MISYLLEGEE PPPAQTTAIR FCRSASAALP PEHHRAFEQK
FGIGIVETMG LTETAAPSFS NPLDPALRKL GSVGRASGCE ARVIDAALAE VPDGSTGELA
IRGPNVMRGY YKNEEATRAS FTPDGWLRTG DLGHRDADGF FFVTGRIKEL IIKGGENIAP
REIDEALLRH PAVLEAAAVG VPDRHYGQEI GVCIVLRDGC ACTEDELRAF STEALGRYKA
PGHYRFVTDL PRGPSGKVQR LKLLPLFER
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