Gene Vapar_3732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3732 
Symbol 
ID7970889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3930832 
End bp3931536 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content64% 
IMG OID644794316 
ProductGlutathione S-transferase domain protein 
Protein accessionYP_002945614 
Protein GI239816704 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.952098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACC TGTCCCGCTT TCCCATCACC CAGAAATGGC CCGCACAGCA TCCTGACCGG 
CTGCAGTTGT ATTCGCTGCC CACGCCCAAC GGCGTGAAGG TGTCGATCAT GCTGGAGGAA
ACCGGCCTGG CCTACGAGCC GCACCTGGTG AGCTTCGAGA CCCACGACCA GATGTCGCCG
GAATTCCTCT CGCTCAACCC GAACAACAAG ATCCCCGCGA TCCTCGACCC CCACGGGCCC
GGCGGCAAGC CGCTCGCGCT GTTCGAATCG GGCGCCATTC TTCTGTACCT GGCCGACAAG
ACCGGCAAGC TGATTCCGCA GGATGCGGCG GGCCGCTACG AAACCATCCA GTGGCTGATG
TTCCAGATGG GCGGCATCGG CCCGATGTTC GGCCAGCTCG GCTTCTTCAA CAAGTTTGCC
GGCAAGGACT ACGAGGACAA GCGCCCGCGC GACCGCTACG TGGCCGAATC GAAGCGCCTG
CTCGGCGTGC TCGACAAGCA CCTGGCCAAC CGCGCGTGGA TCATGGGCGA CGACTACACC
ATCGCCGACA TCGCCTCGTT CCCGTGGATC CGCAACCTGA TCGGCTTCTA CGAAGCGGGC
GACCTGGTGG GCTTCAGCGA GTTCAAGAAT GTGGCGCGGG TGCTCGAAAC CTTCGTGGCG
CGGCCGGCGG TTGTGAAGGG TCTGGGCATT CCCAAGCGCG GTTGA
 
Protein sequence
MTDLSRFPIT QKWPAQHPDR LQLYSLPTPN GVKVSIMLEE TGLAYEPHLV SFETHDQMSP 
EFLSLNPNNK IPAILDPHGP GGKPLALFES GAILLYLADK TGKLIPQDAA GRYETIQWLM
FQMGGIGPMF GQLGFFNKFA GKDYEDKRPR DRYVAESKRL LGVLDKHLAN RAWIMGDDYT
IADIASFPWI RNLIGFYEAG DLVGFSEFKN VARVLETFVA RPAVVKGLGI PKRG