| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3162 |
|---|
| Symbol | |
|---|
| ID | 7973394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | - |
|---|
| Start bp | 3324491 |
|---|
| End bp | 3325654 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644793746 |
|---|
| Product | monooxygenase FAD-binding |
|---|
| Protein accession | YP_002945046 |
|---|
| Protein GI | 239816136 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACAA GCGAATCCAC CATCGGCATC GTCGGCGCGG GCATCGGCGG TCTGGTGGCG
GCCATCGCGC TGCGCCGCGC CGGGCACGAC GTGGCCGTGT TCGAGCAGGC GAAGCAGTTC
GCCCGCGTCG GTGCGGACAT CAACCTCACG CCCAATGCGG TGCGTGCGCT GGACGGCCTC
GGCGTGGGCG AGGCCGCGCG GATCACGGCG GCCCGGCCTT CGCACCGCAT CAGCCGCACC
TACGACACGG GCGAGGAAAC CTCGCGCCTG GAGATGGCCG ATTCGGCCGA GCAGCGCTAC
GGTGCGCCGC AGCTCACCAT CCACCGCGCC GATCTGCTGG CTGCGCTGGC CGACATGTTC
CCGGCCGAGT GCGTGGCGCT GGGCAAGCGC GCGCAGACCA TCGCGGCGGA CGAGAAGGGC
GTGAGCCTCT CGTTCAGCGA CGGCACCGGC GCCCGCGTCG GCGCGCTGCT CGGCGCCGAC
GGCATCCACT CGTGCGTGCG CACCGCGATG TTCGGCGCCG AGAGCCCGCG CTTCACCGGC
ATCGTCGCCT ACCGCGCCGT GGTGCCTGCC GAGCGTGTGG CGGGCGTGCC CAACCTCGGT
GCCTTCACCA AGTGGTGGGG CCCGAATCCG CAGAGCCAGA TCGTCACGTT CCCGCTCAAC
CGCGGCAGGG ACATCTTCAT CTTCGCGACC ACGCCGCAGG ACACCTGGCA CCTCGAATCC
TGGACCGCGC CCGGCAGCGT CGACGAACTG CGCGAGCAGT ACGTGGCCTA CCACCCCGAG
GCGCGCGCCC TGCTCGACGC CTGCGACACG GTGCTGAAGA CCGCGCTGTA CGAGCGCGAC
CCGATGCCGG CCTGGGCCGC CGGCCGCATG GCCCTGCTCG GCGATGCCGC GCACCCGATG
CTGCCCTTCA TGGCGCAGGG TGCGGGCATG GCGATCGAAG ACGCCGTGGT GCTGTCGCGC
CACCTCGAAG GCATTGCCAT GGCCGATGTG CCCTCTGCGC TGCAGGCCTA CCAGACCGCG
CGCATCGAGC GCGCCAGCCA GGTGCAGCTT GGCTCGCGCG GCAACAACTG GCTGCGCGAA
GGCGGCAATG CCGACTGGGT CTATGGCTAC GACGCCTGGG CCGTGCCGTT GGGCGCCCCC
GCCGGCGCCA CTGCCACCGC CTGA
|
|---|
| Protein sequence | MKTSESTIGI VGAGIGGLVA AIALRRAGHD VAVFEQAKQF ARVGADINLT PNAVRALDGL
GVGEAARITA ARPSHRISRT YDTGEETSRL EMADSAEQRY GAPQLTIHRA DLLAALADMF
PAECVALGKR AQTIAADEKG VSLSFSDGTG ARVGALLGAD GIHSCVRTAM FGAESPRFTG
IVAYRAVVPA ERVAGVPNLG AFTKWWGPNP QSQIVTFPLN RGRDIFIFAT TPQDTWHLES
WTAPGSVDEL REQYVAYHPE ARALLDACDT VLKTALYERD PMPAWAAGRM ALLGDAAHPM
LPFMAQGAGM AIEDAVVLSR HLEGIAMADV PSALQAYQTA RIERASQVQL GSRGNNWLRE
GGNADWVYGY DAWAVPLGAP AGATATA
|
|---|
| |