Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3087 |
Symbol | |
ID | 7974297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3243978 |
End bp | 3244955 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644793672 |
Product | tRNA(Ile)-lysidine synthetase |
Protein accession | YP_002944972 |
Protein GI | 239816062 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGAAG CCTTCGAACG CGCCATGGCC GCGTTCGAGC CGGCGCATCT GCCGCTGGCG GTGGGCTTCA GCGGCGGCGC GGATTCCACG GCGCTGCTTG CCGCTTGCGC CTCGGCCTGG CCCGGGCAGG TGCTTGCCTT TCATGTGCAC CACGGCCTGC AGGCCGCGGC CGATGATTTC GAGCGCCATT GCGCGGCCGT GTGCGAACGC CTCGGCGTGC CGCTCGCGGT GCACCGCGTG GACGCGCGCC ATGCGCAGGG CGACAGCCCC GAAGATGCGG CGCGCCGCGC CCGCTACGAC GCTTTTGCAG CCATGGCGCG CATGGATACG GCGCTTGGCG CTATCGAATC GATAGTCCTC GGGCACCATG CGGACGACCA GGTCGAAACC CTTCTGCTGG CCCTCTCCCG GGGCGCCGGC CTGCCGGGCC TCGCGGCCAT GCCCGCGCAT GTGCGGCGCA ACGGGCTGGA CATCTACCGC CCGCTGCTGG CCGTGCCCGG AGCCGACATC CGCGCGTGGC TCAAAAGCGT CGACCTGCCG TGGATCGAGG ACCCGACCAA CGAGGACGAG CGCTACACCC GCAACCGGAT CCGGGCCGTG CTGCTGCCCG CGCTCGCACG GACCTTCCCG CAGTTCCGCG CCACCTTCGC GCGCAGCATC GGCCATGCCG CGCAGGCGCA GGAACTGCTG GGCGAACTCG CGGCGCAGGA CCTGGTCGTG GTGGGCAACC CGCCCCGCAT CGCCGCGCTG CAGGCGCTTT CACGCGCGCG GCAGGCCAAT GTGCTGCGGC ACTGGCTGAT GCAGGCGCAC GGCTGCGCGC CCAGCGCGGC GCAGCTCGAC CAGCTGCTGG ACCAGGTCCG GGCCTGCACC ACCCGCGGCC ACCGGATCCA CCTCAAGGTG GCCAATGGAT TCGCCCAGCG CAGGGGCGAC CTGCTGCATT GGTACAATTC CGGGCCCTCG CCCAAGGCTT CGCGCTGA
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Protein sequence | MNEAFERAMA AFEPAHLPLA VGFSGGADST ALLAACASAW PGQVLAFHVH HGLQAAADDF ERHCAAVCER LGVPLAVHRV DARHAQGDSP EDAARRARYD AFAAMARMDT ALGAIESIVL GHHADDQVET LLLALSRGAG LPGLAAMPAH VRRNGLDIYR PLLAVPGADI RAWLKSVDLP WIEDPTNEDE RYTRNRIRAV LLPALARTFP QFRATFARSI GHAAQAQELL GELAAQDLVV VGNPPRIAAL QALSRARQAN VLRHWLMQAH GCAPSAAQLD QLLDQVRACT TRGHRIHLKV ANGFAQRRGD LLHWYNSGPS PKASR
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