| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2569 |
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| Symbol | |
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| ID | 7970046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 2712268 |
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| End bp | 2713197 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644793156 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002944461 |
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| Protein GI | 239815551 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.639508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGGCG GCACCCGCTG CCGCGCGCCA CGGTCCGCCA ACGCGATGCC GACACTGCCC
AAGAACGAAC GCTTGTACCT GCGCCTCGAC GACGACCCCT TGCACGGGCC GGAGGCCGGC
ATGCCCGCGG ACACGCTGCG CGCCTTTTCG GTCGCCGAGC CGCTGCGGAT GCACGTTGCG
CACATTCTTC TCTACAGGGA AACGCTGCCC GAGGGCCGCG AGGTGCTGGA GCGCGTGCTG
CCCGATGGGG CGGTGCGGCT GGTCTTCAAC CTGGGCGATG CGCCCTCGGC GGGCGAGAGC
GCCGGACATG CGGTCGAGGC CATCGGCGCG TCGGCGGCGC CGGCCCTCGT GCGCCTCTGC
CGGAAGATGG AAGGGCTGTC GGTGACCCTG CGCCCCGGCG CGGCCGCGGC GCTGCTCGGA
AGGCCGGCCA GCGAGATCGC AGGCACTGCC GTGCACCTGG ACGAACTGTG GCGCGGCCGT
GGTGCCGAAC TGCTGGAGCG CATCGCGCTG CAGCCGGACG ACGCGTCGCG CGTGTCGGTG
CTGTGCGCGG CCCTGCAGCG CCGGCTGGCC GATGGCGACG GCGCCGTCCA CGTGGCGGCC
ATGCGCGCGG CGCAACTCAT CGCCACGTCG GGCGGACGGC GTCCGCTGCG CGAGGTGGCG
CAGGCCGTCG GGCTTGGCGA GCGGCGGCTG CAACAGGTCT TTCGGCAGCA GGTGGGCCTG
TCGCCGCGGG CCTGGAGCCG GCTCGCGCGG CTGCATGCCT GCGTGCGCGC CTTGCGCCTG
CAGCGCGAGC CCGCCTGGGC CAGCCTTGCG CTGGATGGCG GCTTCTATGA CCAATCGCAC
CTCATCAACG AGTTCCAGGC GCTTTGCGGC CTCACGCCGA CGGAGTTTCT GGGTCGCGCG
ATTTCGGGTT CTTCCAAGAC GGCGGATTGA
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| Protein sequence | MHGGTRCRAP RSANAMPTLP KNERLYLRLD DDPLHGPEAG MPADTLRAFS VAEPLRMHVA
HILLYRETLP EGREVLERVL PDGAVRLVFN LGDAPSAGES AGHAVEAIGA SAAPALVRLC
RKMEGLSVTL RPGAAAALLG RPASEIAGTA VHLDELWRGR GAELLERIAL QPDDASRVSV
LCAALQRRLA DGDGAVHVAA MRAAQLIATS GGRRPLREVA QAVGLGERRL QQVFRQQVGL
SPRAWSRLAR LHACVRALRL QREPAWASLA LDGGFYDQSH LINEFQALCG LTPTEFLGRA
ISGSSKTAD
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