Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1596 |
Symbol | |
ID | 7974825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1726239 |
End bp | 1727225 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644792196 |
Product | ATPase associated with various cellular activities AAA_5 |
Protein accession | YP_002943513 |
Protein GI | 239814603 |
COG category | [R] General function prediction only |
COG ID | [COG0714] MoxR-like ATPases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTTCC CGACCATCGA TTCCCTTTCC GAAGGCTTGA TGCAGGCCGG CTACTTTGCC GACCGCCGCC TGGCCACGGC CGTGTTCCTC GCGCTCAGGC TGCAGCGTCC GCTGCTGCTC GAGGGCGAGC CCGGCGTCGG CAAGACCGAG CTGGCCAAGG CGCTGTCGAC CGCGCTGAAC CGCGAGCTGC TGCGCCTGCA GTGCTACGAC GGGCTGGAAC AGCGCGAGGC GCTCTACGAA TGGAACTACG CCGCGCAGCT CTTGCACATG CGCGCGGCCG AGGCCACCGG CGCCATCGTG GCCCCCACGC TCGGCGCTGG CGCGTCCTCG CTGCCCCCCG AGGGGGCTCT CGCGCCTTCG GGCGGCCGGG CGGCGCTCGT GCGCGACGTG GAAGCCGAGG TCTACCAGCC GCACTACCTG ATCCGCCGCC CGCTGCTGCA GGCCCTGCAG ACCCCCGCGC CGGGTGCCGT GCTGCTGATC GACGAAGTGG ACCGCGCCGA CGAGCCCTTC GAGGCCTTCC TGCTCGAATA CCTGGGCGAG TACCAGGTCA GCATTCCCGA GCTCGGCACC GTGCGCGCCG TGGTGCCGCC GGTCACCATC CTCACGAGCA ACCGCACGCG CGAACTCAAC GACGCGGTCA AGCGGCGCTG CCTCTACCAC TGGCTCGACT ATCCGGAGCG CGAACGCGAA CTGGCCATCG TGCGGGCCCA GGTGCCGCAG GCCGGCGAAA AACTTTCGGC CCAGGTGGCG GCCTTCGTTG CGCGGCTGCG CGATGCGCCT TTCGTCAACG CCTTCCAGCG CGCGCCCGGC ATCGCCGAAA GCGTGGAGTG GGCAAGGGCG CTGATCGCGC TCGACACCGT CGAGCTCGAC CCCGAAGTGG TGGTCGACAC GGCCGGCATC CTGTTCAAGC AGCGCGACGA CGTGGCGGCG CTCACGCACG AACTGGCATC GGAGCTGCTG AAACCCGAGG AGCCGGTCGC GCCCTGA
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Protein sequence | MIFPTIDSLS EGLMQAGYFA DRRLATAVFL ALRLQRPLLL EGEPGVGKTE LAKALSTALN RELLRLQCYD GLEQREALYE WNYAAQLLHM RAAEATGAIV APTLGAGASS LPPEGALAPS GGRAALVRDV EAEVYQPHYL IRRPLLQALQ TPAPGAVLLI DEVDRADEPF EAFLLEYLGE YQVSIPELGT VRAVVPPVTI LTSNRTRELN DAVKRRCLYH WLDYPERERE LAIVRAQVPQ AGEKLSAQVA AFVARLRDAP FVNAFQRAPG IAESVEWARA LIALDTVELD PEVVVDTAGI LFKQRDDVAA LTHELASELL KPEEPVAP
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