Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1167 |
Symbol | |
ID | 7973336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1281376 |
End bp | 1282467 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644791763 |
Product | histidinol-phosphate aminotransferase |
Protein accession | YP_002943084 |
Protein GI | 239814174 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATCTT CTTCGCCCGC CGCCCGCCCG ATCGACCGCA TCCGCTCCGA CGTGCAGTCC ATGCATGCCT ATGCGGTGCA GGACGCACGC GGCTTCGTCA AGCTCGACGC CATGGAAAAC CCCTTCGGCC TGCCGCCCGC GCTGCAGGCC GAGCTTGGCG CGCGGCTCGG TGCGTTGGCG CTCAACCGCT ATCCGGGCGA GCGCGGCGCC GACCTGCAGC GCGCGCTGGC CGCGCATGCG CAGATGCCCG AGGGCTTTGC GCTGATGCTG GGCAACGGCT CCGACGAACT GATCTCGCTG CTCGCCATTG CCTGCGACGT GCCCGGCGCC GCGGTGCTCG CGCCCGTGCC CGGCTTCGTG ATGTACGCAA TGAGCGCGAA ACTGCAGGGC CTGCGCTTCG TCGGCGTGCC GCTCACGGCC GATTTCGAAC TCGACGAGGC CGCCATGCTT TCGGCCATCG CACGCGAGAA GCCGGCCATC GTGTACCTGG CCTATCCGAA CAACCCCACC GCCAACCTCT GGGACGATGT CGCCATCGAG AAGATCGTGC AGGCCCAGGG CGAGCAGGGC GGGCTGGTGG TGATCGACGA GGCCTACCAG CCCTTTGCCG CCAGGAGCTA CATCGACCGC ATTGCGCGGC ATGGCCATGT GCTGCTGATG CGCACGCTCA GCAAGTTCGG CCTGGCCGGC ATCCGCCTGG GCTACCTCAT GGGCCCGGCC GCGCTGGTCG CGCAGATCGA CAAGGTGCGC CCGCCCTACA ACATCAGCGT GCTCAATTGC GAGTGCGCAC TGTTCGCGCT CGAGCATGCC GAGGTGTTCG AGGCCCAGGC GCGGCAGATC CGCGACGAGC GCCACCGTCT CATGATGGGG CTGGGCCGCC TGGCGGGCGT GAAGGCCTGG CCGAGCGATG CCAACATGAT CCTCGTGCGG GTGCCCGATG CCGCCAAGGC CTTCGAAGGC ATGAAGGCGC GCGGGATTCT TGTGAAGAAC GTTTCTAAAA TGCACGAACT GCTCGCAAAC TGCCTGCGCC TCACCGTCGG AACGGCCGAC GAGAATGCGC GGATGCTCGC GGCACTCGAA GCCTCACTAT GA
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Protein sequence | MTSSSPAARP IDRIRSDVQS MHAYAVQDAR GFVKLDAMEN PFGLPPALQA ELGARLGALA LNRYPGERGA DLQRALAAHA QMPEGFALML GNGSDELISL LAIACDVPGA AVLAPVPGFV MYAMSAKLQG LRFVGVPLTA DFELDEAAML SAIAREKPAI VYLAYPNNPT ANLWDDVAIE KIVQAQGEQG GLVVIDEAYQ PFAARSYIDR IARHGHVLLM RTLSKFGLAG IRLGYLMGPA ALVAQIDKVR PPYNISVLNC ECALFALEHA EVFEAQARQI RDERHRLMMG LGRLAGVKAW PSDANMILVR VPDAAKAFEG MKARGILVKN VSKMHELLAN CLRLTVGTAD ENARMLAALE ASL
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