| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1115 |
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| Symbol | |
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| ID | 7969637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1222265 |
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| End bp | 1223233 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644791711 |
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| Product | PfkB domain protein |
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| Protein accession | YP_002943032 |
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| Protein GI | 239814122 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATTG CACTCACGGG CGAAGCCCTC ATCGATTTCA CCGCCAGCGA GGCCGGCGCG
CTCGCGTTCC TCGGCCACGA GGGCGGTTCG CCGCTCAACA CGGCCGTGGC CTGCGCGCGC
CTGGGCCAGC CCACCGGCTT TCTCACGCAG CTGTCGACCG ACCTGTTCGG CGAACGGCTG
ATGCGTTTTC TCGAACGCAA CGGCGTCGAT ACCGGCTTCA TCCTGCGCAG CAATGCGCCG
TCGACGCTGG CCTTCGTCGA GCGCACGCCC GAGACCAACC GCTACGCCTT CTACACGCGC
GGCAGCGCCG ATGCCACCTG GGCGCCCGAG CCGCCGCCGC AGCTGCCGGC GGAGTGCCGC
TTCCTTCATT TCGGCTCGAT CTCGCTGCTG CAGGAGCCGG CCGCCACGCG CATTGCCGAG
CTGGTCACGG CCAACGCCGG GCGCCGCGTG ATCGTGTTCG ACCCGAACGT GCGGCCCAGC
CTGATTCCCG ACATGGCCGC CTACCGCGAG CGCGTGACGG GCTGGCTGGC CATGGCCGAC
CTGGTCAAGC TCAGCGACGA GGACGCGGAA CTGCTCGCCC CCGGCCAGCC GGTCGATGCG
CTGGCCGCGG AGTGCCTCCA GGCCGGCGCG CATGCCGTGA TCGTCACGCG CGGCGGCGCG
GGCGCCACGC TCTGGCGCAC CGGGCATGCG CCGCTTGCCG TGGCGGCGCC GCAGGTCAAG
GTGGTCGACA CCATCGGCGC CGGCGACACC TTCACGGCCG GGCTTTCGGT GGCGCTGCTT
GCGCACGGCG TCGAGCACCC GGCCCGGCTC GGCGCGCTCG GCGACGACGC CTGGCGCGAG
GTGATGCGCT TCGCCGCCAC CGCCGCCGCC CTCAACTGCA CCCGCGAAGG CGCCGATCCG
CCCACGCTCG ACGCGGTTCA CGCCGCGCTG GCGCAGGAAG ACAATGAGGC CGTCGCTTCC
CGGCCTTGA
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| Protein sequence | MRIALTGEAL IDFTASEAGA LAFLGHEGGS PLNTAVACAR LGQPTGFLTQ LSTDLFGERL
MRFLERNGVD TGFILRSNAP STLAFVERTP ETNRYAFYTR GSADATWAPE PPPQLPAECR
FLHFGSISLL QEPAATRIAE LVTANAGRRV IVFDPNVRPS LIPDMAAYRE RVTGWLAMAD
LVKLSDEDAE LLAPGQPVDA LAAECLQAGA HAVIVTRGGA GATLWRTGHA PLAVAAPQVK
VVDTIGAGDT FTAGLSVALL AHGVEHPARL GALGDDAWRE VMRFAATAAA LNCTREGADP
PTLDAVHAAL AQEDNEAVAS RP
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