| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1015 |
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| Symbol | |
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| ID | 7971986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1110909 |
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| End bp | 1111700 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644791611 |
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| Product | hypothetical protein |
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| Protein accession | YP_002942932 |
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| Protein GI | 239814022 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5446] Predicted integral membrane protein |
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| TIGRFAM ID | [TIGR02458] cobalt transporter subunit CbtA (proposed) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.819928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCTTCC AACGACTGAT CTGGTCCGCG CTGGCGGCGG CCGTGCTGGT GGGCAGCGTG
CAGACCGGCG TGCAGCAGTG GCAGGCCACG CCGATCATCC AGGCGGCCGA AAGCTACGAA
TCGCAGAAGG CCGCGCCTGC AGGCCACGGC CATGACGCGG CGCATGCCCA CGGCGCTGCC
GCGGATGAAG TTCAATGGCA GCCCGAGGAC GGCGCCGAGC GCAGCTTCTG GAGCTGGGTC
GCCAACATGC TGCATGCCTT CAGCATGGCG CTGCTGGTGC TTGCGGCAAT GGGCGTCTGC
CTCTGGCGCG GCACGCGCAT GCGCTCGCTG CCGCTGGCGC TGCTGGTGTC TGCCGCCGGC
TGGCTGAGCT TTCACTTCTG GCCGTCGCTC GGGCTGCCGG CCGAGATCCC CGGCATGGAT
GCGGCCCGGC TGGGTTCGCG CCAGGGCTGG TGGGTGCTGG CCGCAGCCGG CGCGGCGCTG
GCCTGCATCT CGCTCGCGGG CCTGCGCAGT GCCTTGCGCT GGCCCGCGGC TGCGGCCTGG
CTCGCGCTGC CTTTCGTGGT GGGTGCGCCG CAGGCCGCAG GCGATCCTTT CGCGGGCTTC
GGGCCCGAGG CACAGGCCGC GCTGCGGACG CTCGATGCGC GCTTCATCTG GGTGACCACC
TGGATCTCGC TGAGCTTCTG GGCCTCGACG GGCGTGGCCT GCGGCCTGGC CTTCGAGCGC
TGGCTGCGGC CGGTGCTGGC CGCTGCGTTC GGCAATTCGC GCACCGCGCC GGCACTGGAG
GTGAATCCAT GA
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| Protein sequence | MIFQRLIWSA LAAAVLVGSV QTGVQQWQAT PIIQAAESYE SQKAAPAGHG HDAAHAHGAA
ADEVQWQPED GAERSFWSWV ANMLHAFSMA LLVLAAMGVC LWRGTRMRSL PLALLVSAAG
WLSFHFWPSL GLPAEIPGMD AARLGSRQGW WVLAAAGAAL ACISLAGLRS ALRWPAAAAW
LALPFVVGAP QAAGDPFAGF GPEAQAALRT LDARFIWVTT WISLSFWAST GVACGLAFER
WLRPVLAAAF GNSRTAPALE VNP
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