Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0041 |
Symbol | |
ID | 7973999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 43726 |
End bp | 44517 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644790643 |
Product | enoyl-CoA hydratase |
Protein accession | YP_002941970 |
Protein GI | 239813060 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.917664 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGAAG CCCCCGCATT TCATCATCAC CAAGAACTGC GCGAGGAGAT GCGCGGGCCC GTGATGTGGC TCACCATCGA CCGCGAGGAG CGCCGCAACG CCATCAGCCC CGGCGTGCTC GCGGCGCTCT CGGCCGCACT GTCCCGCGCC GACGCCGACC GCGACGTGCG CGCCGTGGTC ATCACCGGCG CGGGCACGCG CGCCTTCTGC GCCGGTGCCG ACCTGCAAGG CGGCGCCTCT TTCAGGTTCG ACCCTGCCGA GCCGTACCAG GGCTTCGCCA ACCTCCTGCG CCAGGCCCGG CAGCTGACGG TGCCGCTGGT CGCGCGCGTC AACGGTGCCT GCATGGCGGG CGGCATGGGC CTCCTGGGCA TGTGCGACAT GGCGGTTGCC GGCAGCCACG CCGTGTTCGG CCTGCCCGAG GTCAAGGTCG GCCTCTTTCC CGCCCAGGTG CTCAGCGTGC TCGGCAACCT GCTGCCGCGC CGCGTGCTGG CCCAGATGTG CCTCACGGGC GAGCCCATCA CCGCCGCGCA GGCGCTCGAG CACGGGCTCG TGAACCGCGT GGGCGAGAAC GTCGACGAAA GCCTGGACTG GCTGCTCGGC CGCATGCTCG ACAAGTCGCC CGCCGCCATC CGCCGCGGCC TGTATACGAT GAAGAAGATC GAGGCCATGG CCTTCGAGGA ATCGATCGCC TTCACCGAGA GCCAGATCGG CCTCTTCGCG CTCACGGAAG ATGCGGCCGA AGGCCAGCTC GCCTTCCGCG AAAAGCGCAA GCCGCAGTGG AGCGGCCGAT GA
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Protein sequence | MAEAPAFHHH QELREEMRGP VMWLTIDREE RRNAISPGVL AALSAALSRA DADRDVRAVV ITGAGTRAFC AGADLQGGAS FRFDPAEPYQ GFANLLRQAR QLTVPLVARV NGACMAGGMG LLGMCDMAVA GSHAVFGLPE VKVGLFPAQV LSVLGNLLPR RVLAQMCLTG EPITAAQALE HGLVNRVGEN VDESLDWLLG RMLDKSPAAI RRGLYTMKKI EAMAFEESIA FTESQIGLFA LTEDAAEGQL AFREKRKPQW SGR
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