Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0008 |
Symbol | |
ID | 7973966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 8597 |
End bp | 9844 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644790610 |
Product | metallophosphoesterase |
Protein accession | YP_002941937 |
Protein GI | 239813027 |
COG category | [R] General function prediction only |
COG ID | [COG1408] Predicted phosphohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGGCA TGCGCCTTGC AGATGCCGTG TCCCGGGCCA CGCCCGTTCC CATTGCCCCC ATGCCGATAC GTTCCCTGAG CGTGCTCACC GCGCTCCTGC ATGTCTACAT TGCGCTGCGG CTGCTGCCCG CGCTGGCCAT GCTCACGCCG GCCTGGCCGC TCGCGCTGGC CGCGCTCGCC ATCTCGGCCC TGACGATCCC GCTGCCCTTT GTCTCGCGCG GCAGGGAGCG CGGCGCCTCG GCGGGCGAAC TGCTCCAGTG GACGGGGCTC ATCAGCATGG GCTGGTTCTC CTCGCTGTTC GTGTCGACGC TGCTGCGCGA CGCGGGCCTG CTGCTCGCCT GGCTGGCGAG CGTGCTGTTC GGCGCGCCAG TGCCCTGGCA TGCCGTGCTG CCATGGAGCG CAATGGCCGT GCTGGTGCTG GCCACGCTGG TGTCGATGGT GGGTTTTCTC AATGCCCGCC GCACCGCGGA CGTGAAGCGC GTGGAGGTTC CGATCCGCGG CCTGCCGGCG GCGCTCGAGG GCTTCACGAT CGCGCAGCTC AGCGACATCC ACGTCGGCCC CACGATCCGC AGCGCCTACA TCCAGCGCAT CGTCGATGCG GTGAACCGGC TCGGCGCCGA TGCCATCGCG ATCACCGGCG ACCTGGTGGA CGGCAGCGTG GCCGAGCTGC GCGAGCACAT CGCGCCGCTG GCCGGGCTGC GTGCGAAGCA CGGCACTTTC GTGGTCACCG GCAATCACGA GTACTACGCC GGCGCGCACG CATGGATCGA CGAGCTGCGC AGGCTGGGCC TGAGGGTGCT GCTCAACGAG CACGTGGTGC TGCAGACGCG CAACGTGCGG GGCGCCCAGA ACGACGAAGA GCTGTTCGAG AGCCAGCTGG TGCTGGCGGG CGTGACCGAC TACACCGCAG GCCATTTCGA TGCCGCGCAC GCCAGCGATC CGCACCTGGC GCTGTTCGAC GCGCCGCCGC TGGTGCACAC GCGGGTGCTG CTCGCGCACC AGCCGCGCAG CGCGACGCTG GCGGCCCAGG CCGGCTACCA GCTGCAGCTG TCGGGCCACA CGCACGGCGG CCAGTTCTTT CCGTGGAACC TGTTCGTGCC GATGCAGCAG CCCTTCACCG CCGGGCTGCA CCGGCTGCAC GACATGTGGG TCTACGTGAG CCGCGGCACC GGCTACTGGG GGCCGCCCAA GCGCTTTGGC GCGCCGTCCG AGATCACGCT GCTGACATTG GTGATGGCGC GCGGCTGA
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Protein sequence | MRGMRLADAV SRATPVPIAP MPIRSLSVLT ALLHVYIALR LLPALAMLTP AWPLALAALA ISALTIPLPF VSRGRERGAS AGELLQWTGL ISMGWFSSLF VSTLLRDAGL LLAWLASVLF GAPVPWHAVL PWSAMAVLVL ATLVSMVGFL NARRTADVKR VEVPIRGLPA ALEGFTIAQL SDIHVGPTIR SAYIQRIVDA VNRLGADAIA ITGDLVDGSV AELREHIAPL AGLRAKHGTF VVTGNHEYYA GAHAWIDELR RLGLRVLLNE HVVLQTRNVR GAQNDEELFE SQLVLAGVTD YTAGHFDAAH ASDPHLALFD APPLVHTRVL LAHQPRSATL AAQAGYQLQL SGHTHGGQFF PWNLFVPMQQ PFTAGLHRLH DMWVYVSRGT GYWGPPKRFG APSEITLLTL VMARG
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