Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3793 |
Symbol | |
ID | 7860532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 4209083 |
End bp | 4210462 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643867896 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002883797 |
Protein GI | 229822271 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.46649 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCATCC AGCACCCACC CGCCCCCCGC GGATTCTCTC GCCGCGGCTT TCTCCAGCTC GGCGGCGGCG CCGCCCTGGT CGCCGCTGCC GGGCCGGCTC TGACCGCCTG CAGCGGCGGT GGCGACGACA TCACGTTCAT GTACTGGGGC TCTGCCTACG AGCAGACGGC CATCAAGGAC ATGCTCGGCA AGTACAACGA GGAGAAGTCC AACGAGGTCC CGGTCAACGG GCAGTACACA CCCGTCGGTG ACTACGAGAC CAAGATCTCG AGCCTCGTCG CGGCCAACAC CCCGCCCGAC ATCGGGTACC TGGGCGTCGG GCAGATGTAC GACCTCGCCG GCAAGGACCA GCTGCTCAAC CTCTACGACT ACGTCGACGC GTACCCCGAG CTGACCGACC GACTGCCGAG CTCGTACTTC TGGTACGGGC CGGACAAGCT CGCGGCGAAC CAGCTCGCGA TGGGCATGCA GATCCTGTAC TTCAACACCG ACTCGTTCGA GGCGGCAGGG CTGGAGCGGC CGCCGTTCGA AGCGACCTCC GCCTGGTCGT GGGACGAGTT CGTGGAGGCG GCGATCGCCC TCACGCTCGA CGACGAGGGG CGCAACCCGT CGGAGAGCGG CTTCGACGCG TCGAACGTCG CACAGTTCGG CACGATCGCG CCGTTCGGGG GAGGCGGACT CAACGCGCTG CTCGCGTCCA ACGGCGCCGG CTACGTCAGC GAGGACGGCC TGCAGTACAC GCTCGACTCG GCGGAGGCGA TCACGGTCCT GCAGAACATC CAGGACCTCG TCTACGAGCA CCGGGTGGCG CCCTCGCCGG CCCAGCTCGG GAAGAACGCT CCGACGACGT CGGTCCAGCT CCAGACGCAA CGCGTCGCCA TGATCGTCGA CGGCAACTGG GCGATGCTCG ACCTGCTCGA GAGCGAGGTT CCGTTCGGCG TCGCCGTCCT CCCTCAGTAC CAGGTGCCGC TGACCGCGAC GGGCGGTGCC GCGGGGGCGA TCTTCGCCGC CACCGAGCAC CCGGAGGAGG CCGTCGAGCT CTACCTCTAC TACAACGACC CGGAGAACGT GGACCTCTTC CAGAACGGCC TCTGGGCGCC GCTCCAGGAG AAGTACTACA CGGACGAGGC AGAGATCGCG AAGTGGGTGG GTGACGACTT CCCGGAGCAC TTCCGCGAGG TCGCGATCGA CACGACCCTC AATCACGGCG TGACGAACTG GGACCAGCAG ACGAAGAACT CCGACTCGCT GTGGCAGAAG ATCACGCCGG CGATGGAGAG CCTGCAGACG GGCGACGCGA CGGCCGAGGA GGTGGCCCAG GGGCTGCGCG AGGAGATCGA GCCGCTCCTG GAGGGCACGT GGCCGGTCCA GGAGCTGTGA
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Protein sequence | MTIQHPPAPR GFSRRGFLQL GGGAALVAAA GPALTACSGG GDDITFMYWG SAYEQTAIKD MLGKYNEEKS NEVPVNGQYT PVGDYETKIS SLVAANTPPD IGYLGVGQMY DLAGKDQLLN LYDYVDAYPE LTDRLPSSYF WYGPDKLAAN QLAMGMQILY FNTDSFEAAG LERPPFEATS AWSWDEFVEA AIALTLDDEG RNPSESGFDA SNVAQFGTIA PFGGGGLNAL LASNGAGYVS EDGLQYTLDS AEAITVLQNI QDLVYEHRVA PSPAQLGKNA PTTSVQLQTQ RVAMIVDGNW AMLDLLESEV PFGVAVLPQY QVPLTATGGA AGAIFAATEH PEEAVELYLY YNDPENVDLF QNGLWAPLQE KYYTDEAEIA KWVGDDFPEH FREVAIDTTL NHGVTNWDQQ TKNSDSLWQK ITPAMESLQT GDATAEEVAQ GLREEIEPLL EGTWPVQEL
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