Gene Bcav_3627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3627 
Symbol 
ID7860969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4039422 
End bp4041653 
Gene Length2232 bp 
Protein Length743 aa 
Translation table11 
GC content74% 
IMG OID643867730 
ProductHNH endonuclease 
Protein accessionYP_002883631 
Protein GI229822105 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0415546 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGAGT CGCCAGGCCA GGGTGGAGAG GCGGTCGCGC CGCGCGTGCT CGAGGCTGGC 
GTCAACCCGC TCGCCGAGGT GCGAGAGCCA GGTGAGCTGC GCGAGGAGCA GGCGCGTGAG
GCTGGTCAGC TGCGCGCGGA GCAGCCGCGT GCAGACCTAG GTTCCGAGCC GGCGTCGACG
TCCGTGCCCG GGATGGGCGA GGCGGCTCGC AGGATGCTCG TCTCCGAGCT TGACGCGTTG
CTGTCGATGG ACGGTCTGGC GGAGTTCGAG GATGGCGTGC CGCTGTCCGA CGCCGAGGTG
CTCGACGTGA TCGCGGCCTG GTCGGCGTTC GAAGCACGCG CCGCTGCTGC CAAGCGGGCG
TGGGCCGGAG CTCTCGGTCG GCGTGCGTCG ATGATCCCGG ACTGGCGTGC GCTGGGCCGG
CCGATCAACG TGCCGAGCGT GGCCGGTGAC GAGATCGCCG TGCGACTCGG GATCTCGCGG
CCGAGTGCCG CCCGGCTGGT CGGGGAGGGC AGCCTCTTCT GCCGCGAGTT CGCGGCGGTC
GGGGAGGCGC TGCGCGACGG CCTCATCGAT GCGGGCAAAG CGCGTGAGTT CGTCGACGCA
CTTCAGGATC AGGATCTGCC CGTCACGCTC GCGGTGATCG ACGAGGTCCT GCCTCAAGCT
CCCGTGCTGG CGCTGCGCCA GCTCGCGGCG GCGATCCAGC GGGCGGTCGT CCGGGTCGAT
CCGGAGCGCG CGTCGGAACG TCACGAGCGA GCCGCTACTC GTCGTCGGCT CCACCGGCCG
CGCCTCCTGC CCGACGGCAT GGCGCGACTC TCCGCGGTCC TGACCGCGGC CCAGGCCGCG
AGCGTCTATG CAGCATGCGA GGGAGCGGCC CGGGCGGCAC GTGCTGCTGG AGACGCGCGC
ACGCTCGAGC AGCTGCGAGC CGATGCACTC TCCGCGATGG GAGCGAGTGC GCTGGCCCAG
GGCCGCATCG GGCCGGCCGA CCCGGGGCCA GTTGTCCCTC CCGCGGCGAC GGAGGTTGAG
CCGGCAGCCG CGTCAGGGGT TGCACAGGGC GAGCTCCCGG CGGCGACGCC GGGATCTGCG
GGGGTCGCGG CGGTGGCGGA GTCGGGATCG GCGGGGGTCG CGCCGGTGGC GGAGTCGGGA
TCGGCGGGAG TTGCGCCGGT GGCGGAGTCG GGATCGGCAG AGGTCGCGCC GGCGCCGGCG
CCGGTATCTG CGGTGGCTGA GGTGACGGCG GCGTCCGCCT CTGCGGAGGT CGAGCCGGCA
GGGGCGTCCG CCTCTGCGGA GGGTGAGTCG TCCGCCGCGC CCGCTCCGGC GGCCGGGGAC
CCGCCCGCGC TGACAGCGGA GGCAGCGACC TCGCCCGCGC CACCGCCACC GCCCGCGCCA
GCGCCGTCGC CTGTGCCTGC GCCTCGGACC GGTGCACAGC GCGGCTTCGT GGCCGCGGAG
AGGTTCACGT TCTCGGGTCC GGCTGCGGTC CTCACGCGCG ATCTCCCGGT GGCCGTGCTG
CGGCACGAGC CGCAGCGTGG CCCGGCGGTG GACATCGCCG ACGAGCTCGA GGAGCTCCTC
GCCGACGGGC GAGGTGCCCC GGTCGGGCAG GTCGAGGAGC GTGCCGCGCC GGGGACATCA
CACGGCGCCG ACCGACCTGA ACCGGGCGAG CCCCGCGAGT TGGCCCCGTC CGGCGATCCG
GGGGCCGCGT CCGCCTGCCC GCTCGCGGAC GCTGCGGAGA TCGTGGGCTA CGGGGCGGTC
GATCCGGCGA CGGCGCGGAT GCTCGCCGTC CAGCCGGGTA TCCGGGTCGT GGTCCGGGAT
CCCGAGGAGG AGGCACGTCG ACGCACCAGT GCGATGCCGC TCTCCCCGAC TCCGTGGGAT
GCGGGTCGAG TGCAGCACGA TCCGCCGGCG GCACTCGCTC GATACGTGCG GCTCCGGGAC
CCGACGTGCG TCGCCCCGGG ATGCTCGGTG TCGTCCGCGT CGTGCGACCT CGATCATGTG
ATCGAGTTCC CGCTGGGGCC GACGGATGCC TGGAACCTGC GCCCCCTGTG CCGGCGGCAC
CATCTGCTCA AGACCCATGC GGGCCACGAG CTCACCGTCG AGCCCGACGG ATCGACGACG
TGGATCACGG CCCTGGGCCA GGTCCGCCGT CGTGCCGTCG ACGGGTCGTG GGAGTCTCGG
CTCGACGCCC GGGCTCAGCC GCGGAGGGTC TGGGACACAG ACAGGAGGCT CGGGGCAAGC
GAGGCTGCGT GA
 
Protein sequence
MYESPGQGGE AVAPRVLEAG VNPLAEVREP GELREEQARE AGQLRAEQPR ADLGSEPAST 
SVPGMGEAAR RMLVSELDAL LSMDGLAEFE DGVPLSDAEV LDVIAAWSAF EARAAAAKRA
WAGALGRRAS MIPDWRALGR PINVPSVAGD EIAVRLGISR PSAARLVGEG SLFCREFAAV
GEALRDGLID AGKAREFVDA LQDQDLPVTL AVIDEVLPQA PVLALRQLAA AIQRAVVRVD
PERASERHER AATRRRLHRP RLLPDGMARL SAVLTAAQAA SVYAACEGAA RAARAAGDAR
TLEQLRADAL SAMGASALAQ GRIGPADPGP VVPPAATEVE PAAASGVAQG ELPAATPGSA
GVAAVAESGS AGVAPVAESG SAGVAPVAES GSAEVAPAPA PVSAVAEVTA ASASAEVEPA
GASASAEGES SAAPAPAAGD PPALTAEAAT SPAPPPPPAP APSPVPAPRT GAQRGFVAAE
RFTFSGPAAV LTRDLPVAVL RHEPQRGPAV DIADELEELL ADGRGAPVGQ VEERAAPGTS
HGADRPEPGE PRELAPSGDP GAASACPLAD AAEIVGYGAV DPATARMLAV QPGIRVVVRD
PEEEARRRTS AMPLSPTPWD AGRVQHDPPA ALARYVRLRD PTCVAPGCSV SSASCDLDHV
IEFPLGPTDA WNLRPLCRRH HLLKTHAGHE LTVEPDGSTT WITALGQVRR RAVDGSWESR
LDARAQPRRV WDTDRRLGAS EAA