| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_3625 |
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| Symbol | |
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| ID | 7860967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beutenbergia cavernae DSM 12333 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012669 |
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| Strand | + |
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| Start bp | 4035620 |
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| End bp | 4037683 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643867728 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_002883629 |
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| Protein GI | 229822103 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3347] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02632] rhamnulose-1-phosphate aldolase/alcohol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000228222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0356352 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGG CGCAGCCCGC CGACACCGTG CCCGCGCCCG TCGCGGAGCT CGTGGCCCGC
AGCAACCGGC TCGGCGCGGA CCCGACGACC ACGAACTACG GGGGTGGGAA CACGTCCGCC
AAGGGGACGG CGTCGGACCC CGTGACGGGC GAGGACGTCG AGCTCCTCTG GGTGAAGGGC
TCGGGCGGCG ACCTGGGCAC GCTCACCGCC GGCGGGCTCG CGGTGCTGCG GCTGGATCGC
GTCCGCGCGC TGACCGGGGT GTACCCGGGC GTCGAGCGCG AGGACGAGAT GGTCGCAGCG
TTCGACTACT GCCTGCACGG CAAGGGCGGC GCGGCGCCGA GCATCGACAC GGCGATGCAC
GCTCTGGTCG ACGCGCCGCA CGTCGACCAC CTCCACCCGG ACGCGGGCAT CGCGATCGCG
ACGGCTGCCG ACGGCGAGCG CCTCACCGCG GAGATCTTCG GCTCCCGCGT GGTGTGGGTG
CCGTGGCGCC GACCCGGGTT CCAGCTGGGG CTCGACATCG CCGCGATCCA GCGCGAGAAC
CCGGACGCCG TGGGGTGCGT CCTCGGCGGC CACGGGATCA CCGCGTGGGG CACCACGAGC
GATGAGGCGG AGCAGCGTTC GCTCGAGATC ATCCGCACCG CTCAGGCGTA CCTCGACTCG
CACGGCGCCG CTGAGCCGTT CGGCCCCGTG CGCGAGGGGT ACCAGGCGCT GCCGGCGCCG
GAGCGCCGGG CGAAGGCTGC GGCCCTGGCC CCGCTGCTGC GCGGGCTGGC GTCCACCGAT
GCCCCGCAGG TGGGCCACTT CACCGACTCC GACGACGTCC TGGACTTCCT CGCCCGCGCC
GAGATGCCGC GGCTCGCCGC GCTCGGCACG AGCTGCCCCG ACCACTTCTT GCGCACGAAG
GTCCGCCCCC TGGTGCTCGA CCTGCCCGCC GACGCGAGCA TCGACGACGC CGTCGTCGTG
CGCCTGCGCG AGCTGCACGC CGCCTACCGC GATGACTATC GCGACTACTA CGAGCGGTAC
GCGGAGCCGG ACTCCCCGGC GATGCGCGGC GCCGACCCGG CGATCGTCCT CGTGCCGGGC
GTCGGGATGT TCTCCTACGG CCGCGACAAG CAGACCGCGC GGGTGGCCGG CGAGTACTAC
GTCAACGCGA TCCACGTGAT GCACGGCGCC GAGGCCGTGT CCGCCTATGC CCCGATCGAC
GAGTCCGAGA AGTTCCGCAT CGAGTACTGG GCGCTGGAGG AGGCGAAGCT CGCGCGCCGT
CCGAAGCCCA AGCCGCTGGC GACGCGCATC GCTCTCGTCA CGGGTGCGGC GTCGGGCATC
GGCAAGGCGA TCGCGACACG CCTCGCCGCG GAAGGGGCGT GCGTCGTCGT CGCCGATCTC
GACGCCGAGA AGGCGCGCGA GGCGGCGGCT GAGATCGGCG GGGCGGACGT CGCGATCGGC
GTCGCCGCCG ACGTGTCCGA CTCCGCTGCG GTGCGGGCCG CCGTGGACGA AGCGGTCCTC
GCGTTCGGCG GGCTCGACCT CGTGGTCAAC AACGCCGGCC TCTCGATCTC CAAGCCGCTG
CTCGAGACGA CCGAGCGCGA CTGGGATCTG CAGCACGACG TCATGGCCAA GGGCTCGTTC
CTCGTCTCCC AGGCGGCCGC GCGCGTGATG ATCGAGGCGG GCCTGGGCGG CGACATCGTG
TACATCGCCT CGAAGAACGC CGTGTTCGCC GGTCCGAACA ACGTGGCGTA CTCCGCGACG
AAGGCCGACC AGGCGCACCA GGTCAGGCTC CTCGCCGCCG AGCTCGGTAC GCACGGCATC
CGCGTCAACG GCATCAACCC CGACGGCGTC GTGCGCGGGT CCGGCATCTT CGCCGGCGGG
TGGGGGGCGC AGCGGGCCGC GACCTACGGG ATCCCGGAGT CCGAGCTGGG CGCGTTCTAC
GCCAAACGCA CGTTGCTCGG GCACGAGGTG CTGCCCGAGC ACGTCGCGGC CGCCGTCGTC
GCCCTGTGCG GTGGGGACCT CACGCAGACC ACCGGGCTGC ACGTCCCGGT CGACTCCGGC
GTCGCCGCCG CGTTCCTGCG CTGA
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| Protein sequence | MTTAQPADTV PAPVAELVAR SNRLGADPTT TNYGGGNTSA KGTASDPVTG EDVELLWVKG
SGGDLGTLTA GGLAVLRLDR VRALTGVYPG VEREDEMVAA FDYCLHGKGG AAPSIDTAMH
ALVDAPHVDH LHPDAGIAIA TAADGERLTA EIFGSRVVWV PWRRPGFQLG LDIAAIQREN
PDAVGCVLGG HGITAWGTTS DEAEQRSLEI IRTAQAYLDS HGAAEPFGPV REGYQALPAP
ERRAKAAALA PLLRGLASTD APQVGHFTDS DDVLDFLARA EMPRLAALGT SCPDHFLRTK
VRPLVLDLPA DASIDDAVVV RLRELHAAYR DDYRDYYERY AEPDSPAMRG ADPAIVLVPG
VGMFSYGRDK QTARVAGEYY VNAIHVMHGA EAVSAYAPID ESEKFRIEYW ALEEAKLARR
PKPKPLATRI ALVTGAASGI GKAIATRLAA EGACVVVADL DAEKAREAAA EIGGADVAIG
VAADVSDSAA VRAAVDEAVL AFGGLDLVVN NAGLSISKPL LETTERDWDL QHDVMAKGSF
LVSQAAARVM IEAGLGGDIV YIASKNAVFA GPNNVAYSAT KADQAHQVRL LAAELGTHGI
RVNGINPDGV VRGSGIFAGG WGAQRAATYG IPESELGAFY AKRTLLGHEV LPEHVAAAVV
ALCGGDLTQT TGLHVPVDSG VAAAFLR
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