Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0433 |
Symbol | |
ID | 7860692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 481855 |
End bp | 482571 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643864510 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002880458 |
Protein GI | 229818932 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0535711 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGA CGCAGGCGGA GGACGGCAAG GCGGAGCGGG TGCGCCGGCA CCTGGAGCAG CTCATCGACA CCTCGCTCCA GCCGCATGAC CGACTGCCTC CCGAGCGACT CCTGGCGGCG CAGCTCGACG TCAGCCGGAT GACCGTGCGC CAGGCTCTCG ACTCGCTCGA GGCCGAGAAG CGCGTCTACC GGGTGCAGGG CTCGGGCAAC TACGTCGCCG AACGCGTCAT CGAGAAAACC ATCCGCCTCA CGTCGTTCAC CGAGGACATG CGGGAACGGG GCATGACGCC AGGGGCGAGG CTCGTGACGA GCGGGACGGA GCACGCCGGC CCGGAGGTCG GTGCGCGGCT CGGGCTCAGC CCCGCGGACG CCGTCGTGAG GATCAACCGG ATCCGCCTCG CCGACGGCGA ACCCGTCTGC CTCGAAGCCG TGCACATCAG CGAGAAGCGA GTGCCCGGAC TCCTCGAGGA GGACCTGTCC GGGTCCCTCT ACGACCTCCT CACCACCCGG TACGACATCG CCGTCTCCAC GGCGCAGCAA CGCATCGGCG CGACGGTGGT CGACCAGGCC GACGCGAAGC TGCTGGAGGT GGCGCCGTTC TCGCCGGCGC TGGTGATCGA GCGCCTCACG CTGGACCAGC ACCGTCGCCC TCTCGAGTAC ACGCGGTCGC TCTACCGAGC AGACAGGTAT TCCTTCCTCA TCGACATCGA GCGCTAG
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Protein sequence | MTTTQAEDGK AERVRRHLEQ LIDTSLQPHD RLPPERLLAA QLDVSRMTVR QALDSLEAEK RVYRVQGSGN YVAERVIEKT IRLTSFTEDM RERGMTPGAR LVTSGTEHAG PEVGARLGLS PADAVVRINR IRLADGEPVC LEAVHISEKR VPGLLEEDLS GSLYDLLTTR YDIAVSTAQQ RIGATVVDQA DAKLLEVAPF SPALVIERLT LDQHRRPLEY TRSLYRADRY SFLIDIER
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