Gene Bcav_0433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_0433 
Symbol 
ID7860692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp481855 
End bp482571 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content69% 
IMG OID643864510 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002880458 
Protein GI229818932 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0535711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA CGCAGGCGGA GGACGGCAAG GCGGAGCGGG TGCGCCGGCA CCTGGAGCAG 
CTCATCGACA CCTCGCTCCA GCCGCATGAC CGACTGCCTC CCGAGCGACT CCTGGCGGCG
CAGCTCGACG TCAGCCGGAT GACCGTGCGC CAGGCTCTCG ACTCGCTCGA GGCCGAGAAG
CGCGTCTACC GGGTGCAGGG CTCGGGCAAC TACGTCGCCG AACGCGTCAT CGAGAAAACC
ATCCGCCTCA CGTCGTTCAC CGAGGACATG CGGGAACGGG GCATGACGCC AGGGGCGAGG
CTCGTGACGA GCGGGACGGA GCACGCCGGC CCGGAGGTCG GTGCGCGGCT CGGGCTCAGC
CCCGCGGACG CCGTCGTGAG GATCAACCGG ATCCGCCTCG CCGACGGCGA ACCCGTCTGC
CTCGAAGCCG TGCACATCAG CGAGAAGCGA GTGCCCGGAC TCCTCGAGGA GGACCTGTCC
GGGTCCCTCT ACGACCTCCT CACCACCCGG TACGACATCG CCGTCTCCAC GGCGCAGCAA
CGCATCGGCG CGACGGTGGT CGACCAGGCC GACGCGAAGC TGCTGGAGGT GGCGCCGTTC
TCGCCGGCGC TGGTGATCGA GCGCCTCACG CTGGACCAGC ACCGTCGCCC TCTCGAGTAC
ACGCGGTCGC TCTACCGAGC AGACAGGTAT TCCTTCCTCA TCGACATCGA GCGCTAG
 
Protein sequence
MTTTQAEDGK AERVRRHLEQ LIDTSLQPHD RLPPERLLAA QLDVSRMTVR QALDSLEAEK 
RVYRVQGSGN YVAERVIEKT IRLTSFTEDM RERGMTPGAR LVTSGTEHAG PEVGARLGLS
PADAVVRINR IRLADGEPVC LEAVHISEKR VPGLLEEDLS GSLYDLLTTR YDIAVSTAQQ
RIGATVVDQA DAKLLEVAPF SPALVIERLT LDQHRRPLEY TRSLYRADRY SFLIDIER