| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_0286 |
|---|
| Symbol | |
|---|
| ID | 7858978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | - |
|---|
| Start bp | 308307 |
|---|
| End bp | 308918 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643864363 |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_002880313 |
|---|
| Protein GI | 229818787 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.784033 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.130384 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGA TCCGGCTGCT CCTGGCGGAC GACCAGGCGC TCGTGCGCGG CGCGCTCGCC
GCGCTGCTCG ACCTGGAGCC GGACCTGGAC GTCGTCGCCC AGGTGGGTCG CGGCGACGAG
GTCCTGGCCG CTGCGCGCGC GGCCAGGTGT GACGTCGCGC TGCTCGACGT CGAGATGCCG
GGCGAGGACG GGATCGCGGC GGCGGCCTCA CTCGCCGCCG GGTACCCCCG ATGCCGGTCG
CTCATCGTGA CGACGTTCGG GCGGCCCGGC TACCTGCGGC GGGCGCTCGA CGCCGGGGCG
AGCGGCTTCG TGGTCAAGGA CACGCCCGCC GACCAGCTCG CCGACGCCGT GCGGCGCGTG
CACGCGGGGC TGCGCGTGAT CGACCCGGAC CTGGCCGTCG CGTCGCTGAC CGTCGGCGAC
AGTCCGCTCA CGGAGCGAGA GCGTGACGTG CTGCTCGCCG CGGCAAGCGG GGGCACCGTC
GCCGACGTCG CGCGCGCCAC GCACCTGTCC GAGGGGACGG TGCGCAACTA CCTGTCGTCG
GCCATCGGGA AGACCGGCGC ACGCACGCGG GCCGAGGCCG CCAGGCTGGC CCAGGAGCAC
GGCTGGCTCT GA
|
|---|
| Protein sequence | MSTIRLLLAD DQALVRGALA ALLDLEPDLD VVAQVGRGDE VLAAARAARC DVALLDVEMP
GEDGIAAAAS LAAGYPRCRS LIVTTFGRPG YLRRALDAGA SGFVVKDTPA DQLADAVRRV
HAGLRVIDPD LAVASLTVGD SPLTERERDV LLAAASGGTV ADVARATHLS EGTVRNYLSS
AIGKTGARTR AEAARLAQEH GWL
|
|---|
| |