| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avin_49890 |
|---|
| Symbol | |
|---|
| ID | 7763841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Azotobacter vinelandii DJ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012560 |
|---|
| Strand | + |
|---|
| Start bp | 5054998 |
|---|
| End bp | 5056362 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643807821 |
|---|
| Product | membrame protein |
|---|
| Protein accession | YP_002802055 |
|---|
| Protein GI | 226946982 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTGC CTCGCGCCAC GGAGCGGCGC CTTTCCCTCG ACCCCTTGCC TGTGAGTAAC
GACGTGTCCG ATGCGATTTC CTCCGAGCCC GGCTCCAGCA TCTATCGCTA TCCCGGCTTC
CTGCCCTTTC TGATCGGCCG CCTCGCGGCC GTCTGCGCCC AGCAGATCCA GGCCGTGGTG
GTGGCCTGGC AAGTCTACGA CGCGACCCGC GATCCGCTGT CGCTGGCCGC TGTCGGTCTG
GCCCAGTTCA TTCCCATGCT GCTGCTGTTG CTGCCGGCCG GCGATCTGAT CGACCGCTTC
GACCGCAAGC GCATCCTCAC CATCAGTTGG GCCATGAGCG CCCTGTGCAG CGCCCTGCTG
CTCTGCCTGT CGCTGGGCGA CAGCCTGAAT GTCCCGCTGG TCTACGTCGC GCTGGCGCTG
TTCGGCTGCG CGCGCGCCTT CACCGGACCG ACCCTGCAGA GCCTGCTGCC GCAGGTGGTG
CCGCGCGAGC GGCTGGCCGC GGCGATCGCC GCCAACAGCA TGATCATGCG CAGCGCCACC
ATCGTCGGCC CGCTGGTCGG CGGCGGGCTC TACGCGCTGG GCGACGGCCC GTTGAGCTAC
GTGTGCTGCC TGGCCGGCTT CCTGCTCGGC CTGACGCTGC TGCGCTGGGT GCCGGTGCGC
TTCGCCGAGC CGCCGAAGAA ACTGGAAGCC ACCGCCTGGC AACGCTTCAC CGCCGGCATC
GTCTTCATCC GCTCGCGGCC GATCATCCTC GGCACCATGT CGCTGGACCT GTTCGCCGTG
CTGCTCGGCG GCGTGGTGGC ACTGCTGCCG ATCTACGCCC AGGAAGTGCT GCAGGTCGGC
CCGGCCGGGC TCGGCGCGCT GCGCAGCGCC ATGGCCATCG GCGAGATACT GGTCGGCCTC
TGGCTGAGCG TGAGGCCCTT CGACCGGCGG GTCGGCCTGA CCATGTTCGC CGCGGTCGCG
CTGTTCGGCC TGGCCAACCT GGTGTTCGCC CTGTCCAGCC TGTTCTGGCT GTCCTTCCTG
GCCCTGATGG TGGCCGGCGG CGCGGACATG GTCAGCATGT ACATCCGCTC CTCGCTGATC
CAGTTCTCCA CCCCGGACGC CATGCGCGGG CGGGTCAACG CGGTGAACAT GCTGTTCATC
GGCTCTTCCA ACGAACTGGG CGAGTTCCGC GCCGGCAGCA GCGCCGCCTG GTTCGGCACG
GTGCCGGCGG CGCTGCTGGG CGCGCTGTGC ACGCTGACGG TGGCGGGCGG CTGGATGTGG
GGCTTCAAGT CGCTGCGCCG GGTCGACCGC TTCGAGGACG CCTCGCCCGA TGCCGAGCCC
GACGCCCGCG CCGTCGCGCC GCGCGAAGGC GCCACGGCCG CGTAG
|
|---|
| Protein sequence | MSVPRATERR LSLDPLPVSN DVSDAISSEP GSSIYRYPGF LPFLIGRLAA VCAQQIQAVV
VAWQVYDATR DPLSLAAVGL AQFIPMLLLL LPAGDLIDRF DRKRILTISW AMSALCSALL
LCLSLGDSLN VPLVYVALAL FGCARAFTGP TLQSLLPQVV PRERLAAAIA ANSMIMRSAT
IVGPLVGGGL YALGDGPLSY VCCLAGFLLG LTLLRWVPVR FAEPPKKLEA TAWQRFTAGI
VFIRSRPIIL GTMSLDLFAV LLGGVVALLP IYAQEVLQVG PAGLGALRSA MAIGEILVGL
WLSVRPFDRR VGLTMFAAVA LFGLANLVFA LSSLFWLSFL ALMVAGGADM VSMYIRSSLI
QFSTPDAMRG RVNAVNMLFI GSSNELGEFR AGSSAAWFGT VPAALLGALC TLTVAGGWMW
GFKSLRRVDR FEDASPDAEP DARAVAPREG ATAA
|
|---|
| |