Gene Avin_39520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_39520 
Symbol 
ID7762841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp4002004 
End bp4002435 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content57% 
IMG OID643806814 
ProductAcyl-CoA thioester hydrolase-like protein 
Protein accessionYP_002801066 
Protein GI226945993 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.12861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCTA GAGAGCAAGA AATCCAGCGT CGGATCGAGT TGTCCGAAAC CCGCATCACC 
AAAGCGGTCT TTCCGTTCAC CACCAACCAC CACAACACCC TGTTCGGCGG TACCGCGCTG
GGCTGGATGG ACGAGATTTC ATTCATTACG GCGACGCGCT TCTGTCGTCT GCCGACGGTT
ACGGTTTCCT CCGACCGGGT CGACTTCAAG CATCCGATTC CGGGCGGTTC GATCGTCGAA
CTGATCGGTC GGGTGGTGCA GGTCGGCAAT ACCAGTTGCA AGGTCGAGGT GGAGATCTTC
GTCGAAGGCA TGTATTGCGG TACCCGCGAG AAAGCCATCA CCGGCGTGTT CAGTTTCGTC
GCCATCGACG AAAACAAGAG ACCACGGGCT ATACTGCCCG ACTTTTCATC GGAAAAGGAC
GAAGCGGCCT GA
 
Protein sequence
MTPREQEIQR RIELSETRIT KAVFPFTTNH HNTLFGGTAL GWMDEISFIT ATRFCRLPTV 
TVSSDRVDFK HPIPGGSIVE LIGRVVQVGN TSCKVEVEIF VEGMYCGTRE KAITGVFSFV
AIDENKRPRA ILPDFSSEKD EAA