Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avin_38530 |
Symbol | |
ID | 7762743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Azotobacter vinelandii DJ |
Kingdom | Bacteria |
Replicon accession | NC_012560 |
Strand | + |
Start bp | 3896961 |
End bp | 3898367 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643806717 |
Product | RNA-metabolising metallo-beta-lactamase family protein |
Protein accession | YP_002800969 |
Protein GI | 226945896 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0506935 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCTCC TCAGCTTTCT CGGTGCGATT CAAGAAGTGA CCGGCTCCTG CTACCTGGTC GAGACGCGCG ACGGCAGCCG CGTGCTGCTC GAATGCGGCA TGCGCCAGGG AGGGCGCCGC GAGGAAGAGG AGGTCAATGC CCGGCCGTTT CCCTTCGATC CGGGCAGCCT CGATGCCGTG GTCATCTCCC ATGCGCATAT CGATCACAGC GGCCTACTGC CGCGCCTGGC CGCCGCCGGC TATCGGGGAC CGATCTTCGC CACCGAAGCC ACCTGCGAAC TGATGAACCT GATGCTGCTG GATGCGGCCC ACCTGCAGGA AAACGATGCG GCATGGGAGA ACAAGTGGCG GGCTCGCCTC GGCAAGCCGC CGGTGCAACC GCTCTACACC ACGGCCGATG CCGAGAAGGC GCTGTCCCTG TGCCGCCCGC AGCCCTATGG CGCCGCGCTG GAGGTGGCTC CGGGCGTGAT CGTCACCTTC CACCCGGCCG GGCACATCCT CGGCTCGGCC ATCGTCGAGA TGGAACTGCA CGATCATCAT CTGACCCGTC GCTTGGTGTT CTCCGGCGAC CTCGGCAACA CCTGCACGCC GCTGATGCGC GACCCGACCC CCTTGTCCAG GGCCGACGTG GTGCTGCTCG AATCCACCTA TGGCGACCGC AACCACCGCA ACAGCGAAGA AACCCTGGAG GAATTCGCCG AAATCCTGCA GAAGGCCCAT CGCGACGGCG GCAACGTGCT GATCCCCTCC TTCGCCGTCG GCCGCACCCA GGATCTGCTT TTCTACCTGG GGCGCTTCTA CCAGGAAGGG CGCCTGCCTC AGCAGGCGGT GTTCCTCGAC AGTCCCATGG CGATCCGCGC CAACGCCATC TATGCGCGCT TCGCCGAAGA GTTCGACCCA CTGGATCGCG ACCTGCTGCG GGCCAAGGGT GTCAAGCGTG CCGAGGACTG GCTACCGGTC CTGCGCATGA CGCCCACTCC CGAGGAGTCG ATGGCGATCA ACCGGATCAA GAGCGGCGCC ATCATCATCG CCGGCAGCGG CATGTGCACC GGAGGACGCA TCGTCCATCA CTTCAAGCAC AATCTCTGGC GCCAGGAGTG CCATCTGGTA TTCCCCGGCT TCCAGGCGCA GGGCACCCTG GGACGGCGGA TCGTCGACGG CGCCGGCAGC GTCAAGGTCC TGCACCAGCG CATCGCCGTG CGCGCGCAGG TGCACACCCT CGGCGGTTTC TCGGCCCATG CCGGGCAATC CCAGTTGATC GACTGGGTGC AGCACTTCGA TCACCATCCC GAGCTCTATC TGGTACACGG AGAACGGGAA AAGATGTTGG TCCTGCAACA GACCCTGCAC GAACGTCTGA ACTGGACAGC CACCATTCCC GAGCGAGGTG AGCAGATAGC GATCTGA
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Protein sequence | MALLSFLGAI QEVTGSCYLV ETRDGSRVLL ECGMRQGGRR EEEEVNARPF PFDPGSLDAV VISHAHIDHS GLLPRLAAAG YRGPIFATEA TCELMNLMLL DAAHLQENDA AWENKWRARL GKPPVQPLYT TADAEKALSL CRPQPYGAAL EVAPGVIVTF HPAGHILGSA IVEMELHDHH LTRRLVFSGD LGNTCTPLMR DPTPLSRADV VLLESTYGDR NHRNSEETLE EFAEILQKAH RDGGNVLIPS FAVGRTQDLL FYLGRFYQEG RLPQQAVFLD SPMAIRANAI YARFAEEFDP LDRDLLRAKG VKRAEDWLPV LRMTPTPEES MAINRIKSGA IIIAGSGMCT GGRIVHHFKH NLWRQECHLV FPGFQAQGTL GRRIVDGAGS VKVLHQRIAV RAQVHTLGGF SAHAGQSQLI DWVQHFDHHP ELYLVHGERE KMLVLQQTLH ERLNWTATIP ERGEQIAI
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