Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_1277 |
Symbol | |
ID | 7411010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | - |
Start bp | 1228547 |
End bp | 1229848 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 643718401 |
Product | major facilitator superfamily transporter |
Protein accession | YP_002575846 |
Protein GI | 222824272 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAAA CCGTTTTACC TTTGTCTTTT ATTGTAGGAA CTAGATTTTT TGGATTGTTT ATAGTTTTAC CAGTTTTAAG TTTATATGCT TTAAATTTAA AAGGAGCCAA TGAGTTTTTA GTAGGGCTTT TAGTGGGTGT GTATGCTCTA ACTCAAATGG CATTGCAAGT TCCTTTTGGA ATCATTTCAG ATAAAATAGG GCGTAAAAAA ACTATGCTAA TAGGACTTGT AGTGTTTATT ATAGGTTCTT TGGTATGTTC ATATGCTGAT GATATTTATA CGATGATGTT TGGAAGGCTT TTACAAGGAG CAGGGGCCAT AGGAGCAGTA GCTACTGCTA TGATAAGTGA TTTTATCAAT GAAGAAAATC GTGGTAAGGC TATGGCTATC ATGGGTTCAT TTATAGGACT TTCTTTTGCA GCTTCTTTGG TGCTTTCTCC TTTAATGAGT GCTAAATTTG GACTTTCAAG TTTGTTTGAT TTAAGTGCCA TTTTAAGTTT AATTTGTATC GTGCTTTTAT TTAGCGTTGT GCCAAAAGAG CATACAATAG TGCATGAAAA TACTAAAACC CCATTAAAAA AGCTTTTAAA AGAAAAAAAC TTAGCTTTGA TGAATCTTAC TAATTGTATG CAAAAAATGC TTATGAGTAT TGCATTTTTA AGTATTCCTT TGGTTTTAGT ACATGAGTTT AATTATCCAA GTGAAAATTT ATGGCATGTT TATGTTAGCT CTATGGTGCT TGGGTTTTTA GCTATGGGTT TATCAGGATC TTTAGGAGAA AAAAGAGGCT TAAGCAAAGA GATATTGCTT TTAGGTGTGG CATTTTTTAT CATAGCTTAT ATTATATTTG CTTTTTCGCA TAATGCTTTA GTGTTTATGG TAGGCGTTGT AGTGTTTTTT ATAGGATTTA ATTTGCATGA GCCTATTATG CAAAGTTGTG CGAGTAAATT TGCTAAGGTA AATGAAAAAG GTGCAGCTTT GGGTGTATTT AATGCTTTTG GCTATTTTGG AAGCTTTTTA GGTGGTGTTG TAGGAGGATA TTTTTTACAT CATTTTAGCT TAGTTACTCT TGCTTTTATT TTGGTTATTT TGTCTGTAAT TTGGTTTGTT TTACTTTTGT TTTTACAAAG TCCAGCGGAT TTTAAAAATG TCTATTTATC TTTAGAAACA AAATATGGTT TAAATAATAT TAAAGGCATA AATGGAGTTT TAGATGTGTA TAAAAATTCT AAATTTTTAG TGATTAAATA CAATAAAAAA CTCACAAGCG AAGAAGAAAT TTTAGCGATT ATTGAAAAAT AA
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Protein sequence | MLKTVLPLSF IVGTRFFGLF IVLPVLSLYA LNLKGANEFL VGLLVGVYAL TQMALQVPFG IISDKIGRKK TMLIGLVVFI IGSLVCSYAD DIYTMMFGRL LQGAGAIGAV ATAMISDFIN EENRGKAMAI MGSFIGLSFA ASLVLSPLMS AKFGLSSLFD LSAILSLICI VLLFSVVPKE HTIVHENTKT PLKKLLKEKN LALMNLTNCM QKMLMSIAFL SIPLVLVHEF NYPSENLWHV YVSSMVLGFL AMGLSGSLGE KRGLSKEILL LGVAFFIIAY IIFAFSHNAL VFMVGVVVFF IGFNLHEPIM QSCASKFAKV NEKGAALGVF NAFGYFGSFL GGVVGGYFLH HFSLVTLAFI LVILSVIWFV LLLFLQSPAD FKNVYLSLET KYGLNNIKGI NGVLDVYKNS KFLVIKYNKK LTSEEEILAI IEK
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