| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1258 |
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| Symbol | pglF |
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| ID | 7410991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 1213220 |
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| End bp | 1214983 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 643718383 |
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| Product | UDP-GlcNAc C4,6 dehydratase |
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| Protein accession | YP_002575829 |
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| Protein GI | 222824255 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.62797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTATA AAAGCAAACG CTTAGGTTTT TTCCTAGGCG CTGATATATT ACTTTTTGTT
ATAAGTATTT ATTTGTCTTT TTCTTTACGC TTTAGTGCGG ACATCCCGAG TGAATTTTAT
GAGGGGATGT TTAAAAGTGC TGTGGTATTA ATAGCATTAA AAATAATTTT TTTAGCTATT
TTTAGAATTT ATCAAGTTGC TTGGAGATTT TTCTCACTTA ATGAAGCGCG TAAACTAGTC
ATTGCTTTAG CTTTAGCTGA ACTTGTATTT TTAGCAATTT ATTATTTTTA TGATGATTTT
TTTAATCCTT TTCCAAGAAG TGTTATAGGA ATAGACTTTG TTTTATCTTG CATGCTCATT
GGAAGTTTGC GTATAAGCAA AAGAATGGTG GTTGATTTTA GAAAGCCAAA ATACAATGAA
GAACATCCTT GTATAGTAGT TGGCGCTACT TCAAAGGCTT TGCATTTATT AAAAGGTGCT
AAAGAAGGGA GTTTAGGGCT TTTTCCTGTG GCCGTAGTAG ATGAGCGTAA AAATTTAATA
GGTACTTATT GTGATAAATT TATCGTTGAA GAAAAAGAAG CTATTAAAAA ATACACTCAA
GAGGGAATTC ATACAGCTAT TATCGCTTTA AAACTTGAGC AAGAAGAACT TAAAAAACTT
TTTGATGAGC TTATTTCTTA TGGAATTAAC GATATTAAGC TTTTTTCTTT CACACAAAAT
GAGGCAAGAG ATATCAGCAT TGAAGATTTA CTTGCTAGGA AACCAAAAGA TTTAGATAAT
GCTTGTGTGA TTGATTTTAT CAAAGATAAA GTTGTTTTAG TAAGTGGAGC TGGTGGAACC
ATAGGAAGTG AGCTTTGTAA ACAATGCATT AAATTTGGTG CAAAACATTT AATCATGCTT
GATCATAGTG AGTATAATCT TTATAAAATT AGCGAAGATT TAAACCAACA CAAAGAAAAA
ATCGAAGCTA TTATGATGAG CATTTTAGAC AAAGAAGCGC TAGAAAAATT ACTAAGTTCT
AAAAAAATAG ATTTAATCTT ACACGCAGCA GCTTATAAAC ATGTGCCTTT ATGTGAGCAA
AATCCACATT CAGCTATTTT AAATAATATC ATAGGTACTA AAAATTTAAT TGATCTTGCA
AAAACTTACA AGGTTGCTAA ATTTGTTATG ATAAGCACTG ATAAAGCTGT AAGACCGACT
AACATCATGG GTTGTACAAA AAGAATTTGC GAGCTTTATA CATTAAGTTC AAGTTGTGAA
AATTTTGAAG TAGCTTGTGT ACGCTTTGGT AATGTTTTAG GCTCAAGTGG AAGTGTTATA
CCTAAATTTA AAGCTCAAAT TGCAGCTAAT GAGCCTTTGA CACTAACCCA CCCTGATATA
GTGCGTTATT TTATGCTAGT AGATGAAGCT GTGCAACTTG TTTTACAAGC TGCGGCTATT
GCCAAAGGTG GAGAATTATT TGTACTTGAT ATGGGCGAAC CTGTTAAAAT CATGGATTTG
GCTAAAAAAA TGCTTTTACT TTCTAATAAA AAATTAGAAA TTAAAATCAC CGGACTAAGA
AAAGGTGAAA AATTATACGA AGAACTTTTA ATTCACGAAG ATGATTTAAA AACCCAATAT
GAAAGTATAT TTGTTACCAC TAGTGAAATT AAAGATTTAA AAATTTTAAA TCAAGAAATA
GAACGATTGC TCCAAAGTAC AGATCCTACA AAAGTTTTAA AGGAAATTGT ACCTGAGTTT
AATCATAACA AAAATGGAGA GTGA
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| Protein sequence | MDYKSKRLGF FLGADILLFV ISIYLSFSLR FSADIPSEFY EGMFKSAVVL IALKIIFLAI
FRIYQVAWRF FSLNEARKLV IALALAELVF LAIYYFYDDF FNPFPRSVIG IDFVLSCMLI
GSLRISKRMV VDFRKPKYNE EHPCIVVGAT SKALHLLKGA KEGSLGLFPV AVVDERKNLI
GTYCDKFIVE EKEAIKKYTQ EGIHTAIIAL KLEQEELKKL FDELISYGIN DIKLFSFTQN
EARDISIEDL LARKPKDLDN ACVIDFIKDK VVLVSGAGGT IGSELCKQCI KFGAKHLIML
DHSEYNLYKI SEDLNQHKEK IEAIMMSILD KEALEKLLSS KKIDLILHAA AYKHVPLCEQ
NPHSAILNNI IGTKNLIDLA KTYKVAKFVM ISTDKAVRPT NIMGCTKRIC ELYTLSSSCE
NFEVACVRFG NVLGSSGSVI PKFKAQIAAN EPLTLTHPDI VRYFMLVDEA VQLVLQAAAI
AKGGELFVLD MGEPVKIMDL AKKMLLLSNK KLEIKITGLR KGEKLYEELL IHEDDLKTQY
ESIFVTTSEI KDLKILNQEI ERLLQSTDPT KVLKEIVPEF NHNKNGE
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