Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_1241 |
Symbol | |
ID | 7410974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 1194139 |
End bp | 1195059 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 22% |
IMG OID | 643718366 |
Product | glycosyltransferase |
Protein accession | YP_002575812 |
Protein GI | 222824238 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00000261425 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTCAAA TTTCCATCAT ACTACCAACT TATAATGTAG AAAAATATAT TGCTAGAGCA TTAGAAAGTT GTATTAACCA AACTTTTAAA GATATAGAAA TCATTGTAGT AGATGATTGT GGTAATGATA AAAGTATAAA TATAGCTAAA GAATATGCTA GTAAAGATGA TAGAATAAAA ATCATACATA ATGAAGAGAA TTTAAAACTT TTAAGAGCAA GACATGAAGG CGTCAAAGTG GCAACTTCAC CCTATATCAT GTTTTTAGAT CCTGATGATT ATCTAGAGCT TAATGCTTGT GAAGAATGCA TCAATATACT AGATAAAAAT ACTGACATGC TCTGTTTCAA TACATATATA ATAAATAATA CAAAAAATCC TATTAATAGC TATTTTAATA ATGTTTATAC TATAAATGAT TTTTTTTTAT TTTTAATAGA AAAAAATAAT TTCATATGGA ATGCTTGGGG TAAATTATTT AAAAAAAATA ATCTAATCAA TACCTTTCTC AGTTTAAATT TAAAAAACAA TAAAATTACA ATGGCCGAAG ATGCATTGAT TTTTGCAGTT TATACAAAAA ATATAAAAAA AATACAAACT TTTAATAAAT GTTTATATAA TTACAATTGC GAAAACAACA ATTCAACTAC CAATCAAAAA TGTATCACTC AAATAAAAGA TTATATAAAA GATTTAAAAT GCTGCTCTCG TGAACTCTCT AATTATAACG ATAATAGTTG TCATAGTTTA TTTTGCCAAT ATATTATTAG TTGTCTGCAA ATCCATAAAT ATGATTTATA TTATAAATAT ATTTATAAAA ATATATTTAT AAAAATCCTA ATAAAGCTAT CTAGAAAAAG ACAAAAAATA AAGCAAAAAT CACTATTAAA AACAATAAAA TACAATGAAT CTAAATTCTA A
|
Protein sequence | MSQISIILPT YNVEKYIARA LESCINQTFK DIEIIVVDDC GNDKSINIAK EYASKDDRIK IIHNEENLKL LRARHEGVKV ATSPYIMFLD PDDYLELNAC EECINILDKN TDMLCFNTYI INNTKNPINS YFNNVYTIND FFLFLIEKNN FIWNAWGKLF KKNNLINTFL SLNLKNNKIT MAEDALIFAV YTKNIKKIQT FNKCLYNYNC ENNNSTTNQK CITQIKDYIK DLKCCSRELS NYNDNSCHSL FCQYIISCLQ IHKYDLYYKY IYKNIFIKIL IKLSRKRQKI KQKSLLKTIK YNESKF
|
| |