Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0197 |
Symbol | exbB1 |
ID | 7410920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 176677 |
End bp | 177237 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 643717332 |
Product | TonB system transport protein ExbB |
Protein accession | YP_002574811 |
Protein GI | 222823238 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0000967122 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATTTTC AAGCAATTTT TCATTTTTTT GAAAATACAA GCTTAATCAC TTATATAGTA TTAGCTTGGC TTTCGGTGTA TTTCATACTT AGTTTTAGTA TATTATTTTC AAGGTTGATG CTTATTAATA AATGGACTCA AAATGAAAGC CAAGCTTTAG AAGCTTTAAT GAGAGGCGAA AAAGATTTAA GTCAAAGTGC ATCAATTTTA AAAAAATGTG TTGAAGTTGA TGAAACAAAG ATGAATATTT ATAAAAATTC TGTTGAAAAA AAAGCTACAG TAGGGTTAAC TTGGCTTGGC ATTATCGCTT CAACCTCTCC TTTTATAGGT CTTTTTGGTA CGGTCATTTC TATACTTGAA ACTTTTGGTG GCTTAGAGAT GCAAAATTCT TTAAGTATTA TAGCTCCTAA AATCAGTGAA GCTTTGGTAG CTACAGGTTG TGGTATTTTA GTGGCGATTC CTGCATACAG TTTTCACTTG ATTATTAAGC GTAAAGCCTA TGAATTGATT AATATCTTAG ATAGTGAGAT CAAAGTATTG GTAAGCTCTA CAAAGGCATA G
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Protein sequence | MDFQAIFHFF ENTSLITYIV LAWLSVYFIL SFSILFSRLM LINKWTQNES QALEALMRGE KDLSQSASIL KKCVEVDETK MNIYKNSVEK KATVGLTWLG IIASTSPFIG LFGTVISILE TFGGLEMQNS LSIIAPKISE ALVATGCGIL VAIPAYSFHL IIKRKAYELI NILDSEIKVL VSSTKA
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