Gene Athe_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_0003 
Symbol 
ID7407238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp1629 
End bp2735 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content37% 
IMG OID643714417 
ProductDNA polymerase III, beta subunit 
Protein accessionYP_002571942 
Protein GI222528060 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000559768 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTTTA TTGTGGATAA AGAAGTTTTA CAAGATAATA TTTCCAAGGT AATACCTGCT 
GCAGCATCAA CAAAGGTAAC ATCAATTTTA GAGTGTGTAT TAATCGAAGC GGAAGATAGA
ATAATATTTA CCACAAACGA TATGAAAATG CAGATGCAAA CAGAATTTGA AGCAGAGATT
TTAGAAAGAG GATCAGCACT TTTAAAAGCA AAACTTCTTT CTGACATAGT CAAAAAACTG
CCAAGCGGTG ACGTGGAAGT TATAAGGGAA GAAAACGAGG TAAAAATCAG AAGCCAGAAG
ATAGAGTTTA GGCTTCCTAC TCTTGAACCG CTTGATTTTC CAAAGATGGA CAGAAAACCT
TCTGAGAGTT TTTGCGAGTT TGTTGCAAGC GAGTTTGTTG ATGCTGTTGA CAAGGTAATA
TTCGCAACCT CAAAAGATGA GACAAGACCA ACATTTACAG GCGTGCTCTT TGAAAAAGAA
GATGATGATT TTGTCAATCT TGTTGGGATG GACGGGCACA GACTTGCAAT ATGCAAAATA
AAACCAGTTG CGGTTGAAGG AAGTTTTTCG AAGATTGTGC CTGCTGAAAA CTTGGATGAT
ATCACAAAGA TAGTGGACAT TGAAGAGCCA GAAAAGGTAA GAGTATCATT TTTTGAAAAC
CAGGCAACAT TTGAGATAGG TTCAACAACG GTGATACTTA CACTTATTTC CGGAAAGTTT
TTCGATTACA AAAGTGCAAT CCCAACAGAG TATTCAACCA AAATTTCAAT TTCATCTGAT
GTTTTAGAAA GCACACTTGA AAGAGCTTCA ATAGTGTCAA AAGATGAAAA AACCAACATC
CAAGCTGTCA TATTTGAGAC AAACGGTATG ATGTTCACAG TAAAATCTGT GTCTGCTGAT
GGAAGGTATG AAGAAGATGT GCTTTGTTCA GTCGAAGGTA AAGACATCAG AGTTGGATTT
AATGTCAAGT ATTTCTTAGA CGTTTTGAAA GAGCTTGATG GTGAAATAAA CCTGTTTATA
ACATCGCAGA CAAGCCCTTC AATTGTGCAA AAGCCAGACG ACCCTAACTA CATCTACCTT
GTTCTTCCTA TAAAGATGCC AGAGTAA
 
Protein sequence
MRFIVDKEVL QDNISKVIPA AASTKVTSIL ECVLIEAEDR IIFTTNDMKM QMQTEFEAEI 
LERGSALLKA KLLSDIVKKL PSGDVEVIRE ENEVKIRSQK IEFRLPTLEP LDFPKMDRKP
SESFCEFVAS EFVDAVDKVI FATSKDETRP TFTGVLFEKE DDDFVNLVGM DGHRLAICKI
KPVAVEGSFS KIVPAENLDD ITKIVDIEEP EKVRVSFFEN QATFEIGSTT VILTLISGKF
FDYKSAIPTE YSTKISISSD VLESTLERAS IVSKDEKTNI QAVIFETNGM MFTVKSVSAD
GRYEEDVLCS VEGKDIRVGF NVKYFLDVLK ELDGEINLFI TSQTSPSIVQ KPDDPNYIYL
VLPIKMPE