| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2568 |
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| Symbol | |
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| ID | 7399793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 2543432 |
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| End bp | 2545105 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643709640 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002567210 |
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| Protein GI | 222480973 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC ACGGAACAGC GAAACCGTCA GACGAACTCC GGAAAGCCGC CATGCGGCGG
CCGCACCTCC GCGAGCACCT TCGGGAGTTC AAACAGATAA CGGGGGAGTT CCCGCAGTTC
ATCGAGGAGC CGAAAGACGA GTACGAGTCG AACCGCCCCA ACGTCATCTA CCCCGTCGGC
GGACCGATCT ACAGCCACAT CTACGGCGAC CTCGGACAGG ACACCAAGTA CTACGCCATC
GAGCCGGAGG TCTCCGGCCC GCAGGCGGAG GTCCTCAACG AGGTGAAAAA CCGCCTCCTC
ACGGTGAGCG GCCAGCACAG CGCCCCCGAC AGCGAATCCG AGTACGACGA CCTCATCGAG
GAGCTGTTAG AGGAGGTCAC CCATGTCGAC GAGCAGAACG GGGGGTTCCG TGGCAGCCTC
TCGAAGGTGC TCAACATGGG GAAGCTGTCG GTCACCGAAG AGACCTACGA GAACATCCGC
TACCGGCTCA ACCGCGACAT CGTGGGGCTC GGCCCGCTCG AACCGGTGAT GCGCGACTCG
GCCAACGAGG ATATTCACGT CATCGGTCCC AAGGAGTGTC ACGTCGATCA CGGCACCTAC
GGCATGCTGG AGACGACCGT CGACTTCGGC ACCCCGAAGG AGTTCGACAA CTGGCTGCGC
AACATGGGCG AGCGGATCGG CGACCCGCTC TCCGACTCCG ACCCCATCGT CGACTCTACG
CTCCCGGACG GGTCGCGTAT CAACATCATC TACTCCGACG ACGTGTCGCT GAAGGGCTCC
TCGCTCACGA TCCGGCAGGG CGAGGAGGTG CCGCTGTCGA TCAACCAGAT CACCAACTGG
GGGACGCTCT CGCCCGAGCT GTCGGCGTAC CTCTGGCTCT GTCTGGAGAA CGAGCAGACG
GTGTTCGTCG TCGGTGAGAC GGCGTCCGGG AAGACGACGA CGCTGAACGC CATCCTCTCG
TACATCCCGA GCGACTCGAA GATCTACACC GCGGAAGACA CCGCCGAGGT CATCCCGCCG
CACAACACCT GGCAGCAGCT ACTGACCCGT GAGGGCGGCG GCGAGGGCTC CTCCGACGTG
GACATGTTCG ACCTAGTCGC TGCCGCGCTC CGATCGCGTC CTGACTACAT CATCGTGGGC
GAGGTCCGGG GCGCCGAGGG GCGCATGGCG TTCCAGGCGG CCCAGACGGG GCACCCGGTC
ATGCTGACCT TCCACGCGTC CGACATCGTC TCGATGATCC AGCGGTTCAC CTCCGAGCCG
ATCAACGTCC CCGAGACGTT CATGGACAAC GCCGACGTGG CGCTGTTCCA GAACCGGGTG
AAGCAGGGCG ATCAGGTGTT GCGCCGGGTG ACCAGCGTTC AGGAGATAGA GGGGTACTCC
AAGGAGATGG AGGGCGTCGT CACCCGCGAG GTGTTCAGCT GGGACCCCGT CGAAGACGAG
ATCGTCTTCC AGGGAATGAA CAACTCCTAC GTGTTAGAAG AGCAGATCGC GACGCTTCTG
GGGTACGCCG ACACCCGTGA CATCTACGAC GACTTGGAGT TCCGCGCGGA GCTGATAGAG
CGGATGATCC AAGAGGGGAT CTTGGGCTAC CACGAGGTGA ACAACGCGAT CGATTCCTTC
CAACGCGACG GCGTCGAGGG GCTCCCCTTC GACATGCACC GGAACGTCAG ATAG
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| Protein sequence | MTEHGTAKPS DELRKAAMRR PHLREHLREF KQITGEFPQF IEEPKDEYES NRPNVIYPVG
GPIYSHIYGD LGQDTKYYAI EPEVSGPQAE VLNEVKNRLL TVSGQHSAPD SESEYDDLIE
ELLEEVTHVD EQNGGFRGSL SKVLNMGKLS VTEETYENIR YRLNRDIVGL GPLEPVMRDS
ANEDIHVIGP KECHVDHGTY GMLETTVDFG TPKEFDNWLR NMGERIGDPL SDSDPIVDST
LPDGSRINII YSDDVSLKGS SLTIRQGEEV PLSINQITNW GTLSPELSAY LWLCLENEQT
VFVVGETASG KTTTLNAILS YIPSDSKIYT AEDTAEVIPP HNTWQQLLTR EGGGEGSSDV
DMFDLVAAAL RSRPDYIIVG EVRGAEGRMA FQAAQTGHPV MLTFHASDIV SMIQRFTSEP
INVPETFMDN ADVALFQNRV KQGDQVLRRV TSVQEIEGYS KEMEGVVTRE VFSWDPVEDE
IVFQGMNNSY VLEEQIATLL GYADTRDIYD DLEFRAELIE RMIQEGILGY HEVNNAIDSF
QRDGVEGLPF DMHRNVR
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