| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1764 |
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| Symbol | thrS |
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| ID | 7399636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1780411 |
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| End bp | 1782360 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643708829 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_002566413 |
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| Protein GI | 222480176 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0076873 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCGAGA CCGATGCGCA GGCCGACGTG ACGGTCGTCC TTCCGGACGG AGCAGAGCTC
GACGTGCCGG CGGGGGCGAC AGTCGAAGAC GTTGCCTTCG AGATCGGCCC CGGGCTCGGT
CGCGACACGG TCGCGGGGAA GATCGACGGC GAACTCGTCG AAAAGTACGC GACGGTCCAC
GACGGCGCAC GGATCGAGAT CGTCACGGAT CAGTCCGACG AGTACCTCAC GGTGTTGCGC
CACTCCGCCG CCCACGTGTT CGCGCAGGCC CTCCAGCGGC TCCATCCCGA AGCGACGCTC
ACGATCGGCC CCCCGACCGA CGAGGGGTTC TACTACGACG TGACCGACGT CGACCTCGAC
GAGGACGACC TCGACGCCAT CGAGGAGGAG ATGGACGAGA TCATCGCGGC CGACTACGAC
ATTGAGCGCG AGGTCCGGTC CCGTGAGGAG GCCAAAGAGA TCTACGCCGA CAACGAGTAC
AAACTGCAGA TACTCGACGA GGAAGCCGAC GACGAGGAGG TCACCTTCTA CGTGCAGGAC
GACTGGCAGG ACCTCTGTCA GGGCCCCCAC GTCGAGTCGA CGGGCGAGAT CGGGGCGACG
ACCCTCTTGG AGGTCTCGGC GGCCTACTGG CGCGGTGACG AGGACAACGA CACGCTGACG
CGCGTGTACG GGACGGCGTT CGCCTCTGAA TCGGATCTGA AAGAGCATCT CGAACTGCGC
GAGGAGGCGT TAGAGCGCGA CCACCGGAAG ATCGGACAGG AGATGAACCT CTTCTCGATC
CCGACGGTGA CCGGTCCCGG CCTCCCGCTG TACCACCCGC CGGGCAAGAC CGTGCTCCGT
GAACTCTCGA ACTTCGCGAA CGAGCTCAAC CGCGAGAACG GCTACGAGGA GGTCGAGACC
CCGCACGTGT TCCGGACGGA GCTGTGGAAG AAGTCCGGCC ACTACGAGAA CTACAAAGAC
GACATGTTCC TCCTCGACGT CAACGACGAG GAGTACGGGC TCAAGCCGAT GAACTGTCCG
GGCCACGCGA CCATCTTCGA CCAGCAGTCG TGGTCGTACC GCGACCTGCC GCAGCGCTAC
TTCGAGAACG GGAAGGTGTA CCGGAAAGAG CAGCGCGGCG AGCTCTCCGG GCTCTCGCGC
GTCTGGTCGT TCACCATCGA CGACGGGCAC CTGTTCGTCC GGCCCGACCA GATCCGTCAG
GAGATCGAGT CGGTCATCGA GATGATCTTC GAGGTCGTCG AGACGCTGGA TCTGGACGTC
GAGGTCGCGC TGGCGACCCG CCCCGACAAA TCCGTCGGCG GCGACGAGAT CTGGGAGTCC
GCGGAAGAGC AGCTCCGCGA CGTGCTCGAA TCGGGCGGCT ACGAGTACGA CGTCGAGCCC
GGCGACGGCG CCTTCTACGG CCCGAAGATC GACTTCGGCT TTGAGGACGC GCTGGGTCGC
GTCTGGGACG GCCCCACCGT CCAGCTCGAC TTCAACATGC CCGACCGGTT CGACCTGACC
TACACGGGCG AGGACAACGA AGACCACCAG CCGGTGATGA TCCACCGCGC GCTGTACGGG
AGCTACGAGC GCTTCTTCAT GGTGCTCATC GAGCACTTCG ACGGCGACTT CCCGCTGTGG
CTCGCGCCCG AACAGGTCCG CATCCTCCCC GTCTCCGACG AGACGCTCGG CTACGCCCAC
CGCGTGAAAA ACGAACTGGA GGACGCCGGC TTCCGCGTCG AGGTCGAGGA CCGCGACTGG
ACGGTCGGTC GCAAGATCCG CGCCGGTCAC GACGACCGGC TCCCGTACAT GGTCATCGTC
GGCGAGGACG AGCAGGAGGC GGGCACCGTC TCGGTCCGTG ACCGCTTCGA GAACCAACGC
GGCGATGTCG ACCTCGACGC GTTCGTCGAC CACCTCGTCG CCGAGCGCGA CGAGAAGCGT
ACTGAGCCGG AGTTCGTCGA CGCGGAGTGA
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| Protein sequence | MSETDAQADV TVVLPDGAEL DVPAGATVED VAFEIGPGLG RDTVAGKIDG ELVEKYATVH
DGARIEIVTD QSDEYLTVLR HSAAHVFAQA LQRLHPEATL TIGPPTDEGF YYDVTDVDLD
EDDLDAIEEE MDEIIAADYD IEREVRSREE AKEIYADNEY KLQILDEEAD DEEVTFYVQD
DWQDLCQGPH VESTGEIGAT TLLEVSAAYW RGDEDNDTLT RVYGTAFASE SDLKEHLELR
EEALERDHRK IGQEMNLFSI PTVTGPGLPL YHPPGKTVLR ELSNFANELN RENGYEEVET
PHVFRTELWK KSGHYENYKD DMFLLDVNDE EYGLKPMNCP GHATIFDQQS WSYRDLPQRY
FENGKVYRKE QRGELSGLSR VWSFTIDDGH LFVRPDQIRQ EIESVIEMIF EVVETLDLDV
EVALATRPDK SVGGDEIWES AEEQLRDVLE SGGYEYDVEP GDGAFYGPKI DFGFEDALGR
VWDGPTVQLD FNMPDRFDLT YTGEDNEDHQ PVMIHRALYG SYERFFMVLI EHFDGDFPLW
LAPEQVRILP VSDETLGYAH RVKNELEDAG FRVEVEDRDW TVGRKIRAGH DDRLPYMVIV
GEDEQEAGTV SVRDRFENQR GDVDLDAFVD HLVAERDEKR TEPEFVDAE
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