Gene Hlac_1615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1615 
Symbol 
ID7399564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1634931 
End bp1635587 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content67% 
IMG OID643708681 
Productferredoxin 
Protein accessionYP_002566270 
Protein GI222480033 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.640152 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTCCC CGTTCGACGT GCTCGGATTA GACGACGACG CGGACGAGGC CGACGTCGAG 
CGGGCCTACC GCGAGCGGGT GAAAGAGGCC CACCCGGACC AGGGCGGGAC CGTCGAAGAG
TTCCAGCTCG TCAGGCGCGC CTATCGCGAA CTCGGCGAGC GGGACCGAAA CGGCGACGCC
GACGACGAGA CCGATCCCGC CGACATCGAT CTGACCGACG AGGCTGGCGA GGTCGACGCG
GTGCAGCCGG TCCGTGTCGA GTTTCTCGAC TACGAGGCGA TCGACGACTA CGGGTGGTCG
CTCGACGACG ACGACCTATT TCGGAAGGCG TCGCACGCCG ACCTCGACCC CGCGGCCCAC
GGTCGTCTGC TCGTCCACCC CGACGAGAGC CTGCTAGAGG CGGCCGAGCG GAGCGGCTTC
GGCTGGCCGT TCTCCTGTCG TGGCGGTGCG TGCGCGAACT GCGCCGTCTT CCTCGTGGAA
GGGGAGCTGT CGCAACCGGC CGACCACATC ATGCCCGAGG AGCTGGCGGA GCGCGGGTTC
CGGCTCTCCT GTAACGGCTA TCCGGTGAGC GACGAGCTGA AGGTCGTCTT TAACGTCAAG
CAGCTCGCCG AACTCGACGA TCTCATTCTC CCGCCGGGAC CGTTCACCCG ACGGTGA
 
Protein sequence
MVSPFDVLGL DDDADEADVE RAYRERVKEA HPDQGGTVEE FQLVRRAYRE LGERDRNGDA 
DDETDPADID LTDEAGEVDA VQPVRVEFLD YEAIDDYGWS LDDDDLFRKA SHADLDPAAH
GRLLVHPDES LLEAAERSGF GWPFSCRGGA CANCAVFLVE GELSQPADHI MPEELAERGF
RLSCNGYPVS DELKVVFNVK QLAELDDLIL PPGPFTRR