| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1381 |
|---|
| Symbol | |
|---|
| ID | 7400700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 1391227 |
|---|
| End bp | 1391931 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643708443 |
|---|
| Product | AzlC family protein |
|---|
| Protein accession | YP_002566040 |
|---|
| Protein GI | 222479803 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
|---|
| TIGRFAM ID | [TIGR00346] 4-azaleucine resistance probable transporter AzlC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.690005 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACGGAG ACCTCCTCGA CGGCAACTCC TTTGACGGTG ACATCTGGGC CGGCGTCCGA
GACGTGTCGC CGCTGCTGCT CGGGATCGTC CCGTTCGGAC TCGTCGCCGG CATCGCCGCC
GTCAACGCCG GGCTCGGACT GGCCGAGGCG GTCGGAATGT CCGTGATCGT GTTCGCGGGG
GCCTCTCAAC TCGCCGCGAT CGAGCTGATC GGATCGAACG CGCCGCTCGC GGTCGTGGTC
GGCACCGCGG TCGTGATCAA CGTCCGGATG GTGATGTACT CGGCCTCCAT CGCACCGCAC
TTCGCGGACT ACGGTCGCAG GCTCCGGGCG GGACTCGCGT ACGTGCTCAC CGATCAGGCG
TACGCGCTCT CGGTCGCGGA GTTCGAGCGG AACCCGGAGC GGAGCCGGTG GCGATACTAC
CTCGGCGCGG CCGCGACGCT GTGGGTCGTC TGGCAGATCG CGACGGTGGT CGGCGTCGTC
GTCGGCGCTA GCGTCCCCGA CGCGTGGGGG CTGACATTTG CGGTCCCGCT GGTGTTCCTC
GCGCTCCTCG TTCCCGCGAT GAAGGACCGG CCGACCACCG CCGCGGCCGT TGCCGGCGGT
ACCATCGCGG TCGTCGCCGC CGGGCTCCCC CTGAATCTCG GCCTGCTCAC GGGGGCAGTC
TCCGGAATCC TCGTCGGCCT GCTAACGGAG GTGTTCGGCG AGTGA
|
|---|
| Protein sequence | MDGDLLDGNS FDGDIWAGVR DVSPLLLGIV PFGLVAGIAA VNAGLGLAEA VGMSVIVFAG
ASQLAAIELI GSNAPLAVVV GTAVVINVRM VMYSASIAPH FADYGRRLRA GLAYVLTDQA
YALSVAEFER NPERSRWRYY LGAAATLWVV WQIATVVGVV VGASVPDAWG LTFAVPLVFL
ALLVPAMKDR PTTAAAVAGG TIAVVAAGLP LNLGLLTGAV SGILVGLLTE VFGE
|
|---|
| |