| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0112 |
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| Symbol | |
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| ID | 7401633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 118518 |
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| End bp | 120371 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643707176 |
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| Product | TrkA-N domain protein |
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| Protein accession | YP_002564788 |
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| Protein GI | 222478551 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.440921 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCAGCC TGTTGCCGGT CATCGCGGCG ATCCTCGTGT CGGGACTCGT CGTTCAGCTG
GTCGCTCACC ACCTAAAGAT ACCGAGCGTC ATCTTCTACC TCCTCATCGG GGTCGTCTTG
GGACCGGAGG TGTTGGGGCT CGTCACCTTA GATACGTTCG GAAACGGACT TGAGATAATT
GTCGGGATAA GCGTCGCGAT CATCGTCTTC GAGGGGGCGT TCGCCCTGCG GATCGAGCGG
ATCCGGGGTG CATCCACGGT ATCACTCCGG CTAGTGACGA TCAGCGCTCT CGTAATGTTC
CTCGGAACGG CAGCCGCGGT CCGGTTTTTT GAGGGTGCCA ACTGGGAGAT ATCGCTGCTC
ATCGGTGCGC TACTAGTGGC GACCGGACCG ACCGTGATCA CACCGATACT CAACGTCGTC
CGCGTCAGGG ACCACGTCGC GGCCGCACTA GAGACCGAGG GAATCGTCAA CGACGTGACG
GCCGCGATCG TCGCCGTGGT GATCTTCGAG ACACTGCTGC TCGACGACCT CGGGGTTCCG
GCGACACTCT TCTCGTTCGT CGAGCGGCTC GGCGTCGGCG TGCTTGCGGG GGTGCTCGCG
ACGGTGGTGA TTTACTACCT GTTAGACAGC GATCTGGTCC CCGAACGCGA CGTGCAGGCG
TCCCAGTTCC TCGTGTTAGC GGCGGCAGTC GGAGCGTTCG CAGCCGCCGA AGCCGTCGCC
GCCGAGGCGG GCATCGCGGC AGCCGCGACG AGCGGGATCC TACTGGGGAA CCTCGACATC
AACAACAGAG AGGAGATCGA GCGGTTCGCG GAGAATACGA CGCTCGTCGT CCTCTCGTTC
GTGTTCATCT CGCTGGCCGC GCTGATCAAC GTCGAGGCGA TCGCAGCACT CGGCCTCGGA
GCGGTCGCTC TCGTTCTCGT GATCATGCTC GTGCTCCGAC CGCTCGGGGC GCTGATCGCC
ACGGCCGGCG TCGAGCGGTT CACGAGGCCG GAACGGCTGT TCCTCGCGAG CGTGGGCCCG
CGCGGGATCA TTCCGGCGAG CGTGGCCACG CTGTTCGCCA TCGAACTGGA GCTAGCCGGA
AATGTGGCGG CGGGCGAACT ACTGGTCGGG ACGGTGTTCG CCGTCATCTT CGCGACGGTC
GCGATCGAGG CCGGCCTGGC GCGACAGATC GGTGACGTTC TCGGAGTATC ACCAATGCGC
ACGATCATTA TCGGCGGCGG CCGGGTCGGC CGGGCGCTCG CCACACGACT GGAGCGGCGG
GGCGAGTACG TCGTCATCGT CGAGATAGAC GACGAAGAGA TCGAACGGGC GCGCTCGGAG
GGGTTCACCG TGCACGAGGG CGACGGCAGC GACACGGAGA CGCTGCGCGG CGCGGGCATC
GGAGACGCCA AGCGTGTGAT CACGGTGACT GGTGACGACG ACATCAACCT CCTCGCATGC
CAGCTCGCGA TCACGAAGTT CGACATCGAG GCGGTGTATT CACGGGTGAA CGAGCCGGAT
AACGTCGATG CCTTTGACAG CATCGGCGTG AAGGCGATCG ACTCGCCGAC GGCGACGGCA
GTGGCCATCG ACGACGAGAT CGAGCGGCCG GCGATCACTC ACTGGATGAG CGAGCTGGGC
GACAGCCACG ACGTTCAGGA GGTTGAGGTG ACCGCAGAGA ATCTCGCCGG AAAGACGATT
CGCGACCTCA ACGCACAGAT TCCCGACGGC ACCTTCGTCG CCGTCGTCAG CCGCGACGGC
GAGAATCACG TGCCGTCGGC GGACAGCGTG CTGGAGTACG GCGACCACGT CACCTTTATC
GGCGATACGG ATGCGGTTAA GCGCGCGATG AAGCGGTTCC ACCCACACGA CTGA
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| Protein sequence | MSSLLPVIAA ILVSGLVVQL VAHHLKIPSV IFYLLIGVVL GPEVLGLVTL DTFGNGLEII
VGISVAIIVF EGAFALRIER IRGASTVSLR LVTISALVMF LGTAAAVRFF EGANWEISLL
IGALLVATGP TVITPILNVV RVRDHVAAAL ETEGIVNDVT AAIVAVVIFE TLLLDDLGVP
ATLFSFVERL GVGVLAGVLA TVVIYYLLDS DLVPERDVQA SQFLVLAAAV GAFAAAEAVA
AEAGIAAAAT SGILLGNLDI NNREEIERFA ENTTLVVLSF VFISLAALIN VEAIAALGLG
AVALVLVIML VLRPLGALIA TAGVERFTRP ERLFLASVGP RGIIPASVAT LFAIELELAG
NVAAGELLVG TVFAVIFATV AIEAGLARQI GDVLGVSPMR TIIIGGGRVG RALATRLERR
GEYVVIVEID DEEIERARSE GFTVHEGDGS DTETLRGAGI GDAKRVITVT GDDDINLLAC
QLAITKFDIE AVYSRVNEPD NVDAFDSIGV KAIDSPTATA VAIDDEIERP AITHWMSELG
DSHDVQEVEV TAENLAGKTI RDLNAQIPDG TFVAVVSRDG ENHVPSADSV LEYGDHVTFI
GDTDAVKRAM KRFHPHD
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