| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0029 |
|---|
| Symbol | |
|---|
| ID | 7401382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 30107 |
|---|
| End bp | 32185 |
|---|
| Gene Length | 2079 bp |
|---|
| Protein Length | 692 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643707088 |
|---|
| Product | SpoVR family protein |
|---|
| Protein accession | YP_002564705 |
|---|
| Protein GI | 222478468 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2719] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0800461 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGACG AGCGAGTCGA AGCGAAACGC GAGGCGGAGT CGCTCGGAGT ACCGGCGGCG
GAAGCGCGCG CGCTCGCCGA ACGGCTCGGG CTGGAGCCGT ACCCGGTGCG GTACTGGATC
GTCGACCACG ACGAGATGAA CGAACTGATC GCGTACGGCG GCTTCCAGCG GCGGTACCCC
CACTGGCGGT GGGGAATGAA CTACGAGCGG CAGTCGAAGT TGGATCGCCA CGGGCTCGGG
AAGGCGTTCG AGATCGTCAA CAACGACGAT CCGAGCCACG CGTTTCTCCA GGAGTCGAAC
TCGCCCGCCG ACCAGAAGGC GGTGATAACC CACGTCGAGG CCCACGCGGA CTTCTTCGCG
AACAACCGGT GGTTCGGCCT GTACGCCGAC CGCGGCAAGG GCGGACCGAA CGCCGCGGCG
CGGCTGGAGC GCAACGCCGA CCGGATCGCG GCGATCGCCG ATCGTCCGGA GGTCGACCGC
GACGAGGTCG AGCGCCTGAT CGACGCTGTG AGCGCGCTGG AGGACACGAT CGACCAGCAC
AGCCCGGCCG ACGCCGCGCG GTCGGTCGAC GAACCGGGAG TCGACGAGGA CGTGAACGGC
CCTGACGACG ATCCGCTCGC GGCGATCGAA GAGCGGATCG CGGAGCTGGA CCTCTCCGAA
GAGGTGCGTC GTGACGTGTT CGATGACGAG TGGCTCGAAG CCAGAGGCGA GGGCGTCGAG
CCGGAGGAGC CGCGCCCGGA CGTGCTCGCG TTCCTGCGTG ATTACGGGAA GCGGTACGAC
CCGGAGAGCG GAAAGGCGGT CGACCGCGAG CCGTGGGAGA CGACCGTCAT CGACGCGCTT
CGCGAGGAGG CGTACTACTT CGCGGGCCAG AAGTCGACGA AGGTGATGAA CGAGGGGTGG
GCAACATATT GGGAGTCAGT CATGATGGGT GGCGAGGGGT TCGCCGATCC CGACGAGTTC
CTCACGTACG CCGACCACAT GTCCCGGGTG CTCGGATCGC CCGGGCTCAA CCCCTACAAG
CTCGGGTTCG AGCTGTGGAC CCACGTGGAG TTGCGGGCCG CCCGTCGCGA CGTGATCGAC
AAGCTGCTTC GGATCGAGGG AGTGACGCCA GAGAATTTCC ACTCGCGGAT CGACCTCGAT
GAGGTCGCCG CAGCGCTCGA ACCTCATCCC GCGATCGCGG GGGCGGGACC GGCGACGCTC
GACGAACTGG CCGAGCTCGC CGCCGACCGC GACCCGCGTG TCGACGCCGA GGCGGTCGAC
CGGGCGCTGT CGGCGCGGGA CGGAGAGAGT CCGGGAACCG ACAGCGACGC TGGCCCCGAC
TCCGGCCCGG ACATCGAGCG CTACCCGTGG AAGCTGCTCA CGCGCGAGGG CCTCGCGGAG
CGACACTACG TCCTCTCGCG GCCGGAGCAT CGGAACTCTC TCCGGAACGT CTCGCGGGAG
ACGTTAACCG AGCAAGCGCG GTACATGTTC GACGTCGATC GATATGCGAC GGTCGACGAG
GCGCTCGCCG ACGTGGATCG TGCGACGGGC TGGGACCGGA TGCTCGAAGT CCGCGAGAGC
CACAACGACG TAACGTTCAT CGACGCGTTC CTCACCGACG AGTTCGTGCG CGAGGGGAAC
TACTTCACCT ACGAGTACAG TCGGGCGACC GAACAGCACC GCGTCGCCAG CGTCGACGCC
GACGACGTGC GGAAGAAGCT TCTGTTGCGG TTCACGAACT TCGGGAAGCC CACGGTCGTC
GTACTCGACG GCAACTTCCG GAACCGAGGC GAACTCCTCT TGGGCCACCG GTACAACGGG
GTCGCTCTCG ACGAGGAATC GGCGAGAGAG ACGCTGAAGC GCGTCTTCGA GCTGTGGGGG
CGGCCGGCGA ACCTCGCGAC GATCCGCGTC GAGTACTCCG ACGAGGCGAT CCGCCGCGCC
ATGCGGCGGG GCACCGAACC GGAGGGAAAA GAGGTCGGCG TGCGCTTCCA GTACGACGGC
GGCGAGGTGA CCGAACACGA CCTCGATCCG GAGATCAAAG CGCGGATCGC GGCCGACGAG
ATCGACTACG ACACGAAACC CGACGACTGG CTGGCGTGA
|
|---|
| Protein sequence | MRDERVEAKR EAESLGVPAA EARALAERLG LEPYPVRYWI VDHDEMNELI AYGGFQRRYP
HWRWGMNYER QSKLDRHGLG KAFEIVNNDD PSHAFLQESN SPADQKAVIT HVEAHADFFA
NNRWFGLYAD RGKGGPNAAA RLERNADRIA AIADRPEVDR DEVERLIDAV SALEDTIDQH
SPADAARSVD EPGVDEDVNG PDDDPLAAIE ERIAELDLSE EVRRDVFDDE WLEARGEGVE
PEEPRPDVLA FLRDYGKRYD PESGKAVDRE PWETTVIDAL REEAYYFAGQ KSTKVMNEGW
ATYWESVMMG GEGFADPDEF LTYADHMSRV LGSPGLNPYK LGFELWTHVE LRAARRDVID
KLLRIEGVTP ENFHSRIDLD EVAAALEPHP AIAGAGPATL DELAELAADR DPRVDAEAVD
RALSARDGES PGTDSDAGPD SGPDIERYPW KLLTREGLAE RHYVLSRPEH RNSLRNVSRE
TLTEQARYMF DVDRYATVDE ALADVDRATG WDRMLEVRES HNDVTFIDAF LTDEFVREGN
YFTYEYSRAT EQHRVASVDA DDVRKKLLLR FTNFGKPTVV VLDGNFRNRG ELLLGHRYNG
VALDEESARE TLKRVFELWG RPANLATIRV EYSDEAIRRA MRRGTEPEGK EVGVRFQYDG
GEVTEHDLDP EIKARIAADE IDYDTKPDDW LA
|
|---|
| |