Gene Hlac_3140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3140 
Symbol 
ID7399271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012028 
Strand- 
Start bp379729 
End bp380724 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content61% 
IMG OID643706942 
ProductZinc finger TFIIB-type domain protein 
Protein accessionYP_002564564 
Protein GI222476043 
COG category[K] Transcription 
COG ID[COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGAGG GGCTCACTGT ACTGGCGAGT TCCCGAAACA CGGTGAGAAC GATGGCAACT 
AGAGACATCT ACGAGACGAC GTTCGACGAA GACGTCCAGA CCGACACGAG GTCGAATCAG 
TGTCCCGAGT GCGACGGCCG AGTCACCACT AATACAGTCG AAACCGTCTG CGAGGAGTGT 
GGGCTCGTCG TCGACGAGCA GCGGATCGAC CACGGACCAG AGTGGCGAGG GTTCGACGAA 
GACGAGCGTG AACGGACTGG CGCTCCGTTG ACGGCAGCGC GGCACGATCG GGGGTTGTCG 
ACGGAGATCG GGCGCGGGAC CGATACGAAC GGGAATGAAC TCTCCGGAAA GAAGCGACGC 
CGGCTCGCCC GGATGCGGCG TGAACAGACG CGCGGGCGGT TTCAGTCGAA AGCTGAACGC 
AACCTCGCAT ACGGGCTGGG CGAGGTTCGC CGTCTGGCGA GTACCCTCGA GCTCTCCGAT 
TCGATCCGCG ACCAGGCGTG TCAGCTCTTC CGGAGTGCCC AGAACGAGGA CCTGCTTCGG 
GGCAGATCCA TCGAGGCCAT CGCCACGGCT AGCGTGTACG GGGCCTGCCG CTGTAACGAT 
CGACCAGTGA TACTCGACGA GGTCGCTGAT TCAGCACGCG TCGAACTGTC TCGAGTGAGA 
AACGCGTACA AAACGCTGAA TACAGAATTA GGACTCCCTA CCCCACCGAG AAGGCCGCAG 
TCGTTCATTC CGCGCTTCGC GTCAGAATTG GACGTCGCTG ACACGGTCCG ACAGCGGGCG 
TTTGAACTCG CAAAGGGCGC TGAAGCGACG ATTATCTCGA ACGGATGCCA ACCGACAGGT 
GTCGCAGCGG CCTGCCTCTA TAAGGCTGCT CGGGAGCAGG GACAATTTTT CACGCAAACA 
GATCTCGCAG AGGTGGCGGA GACAACGCCG GTAACGATAC GCACACGATG GAACGAACTA 
GAGGAGGTCG ACGATTCGAA GTCAGCCCCC GCGTAG
 
Protein sequence
MGEGLTVLAS SRNTVRTMAT RDIYETTFDE DVQTDTRSNQ CPECDGRVTT NTVETVCEEC 
GLVVDEQRID HGPEWRGFDE DERERTGAPL TAARHDRGLS TEIGRGTDTN GNELSGKKRR 
RLARMRREQT RGRFQSKAER NLAYGLGEVR RLASTLELSD SIRDQACQLF RSAQNEDLLR 
GRSIEAIATA SVYGACRCND RPVILDEVAD SARVELSRVR NAYKTLNTEL GLPTPPRRPQ 
SFIPRFASEL DVADTVRQRA FELAKGAEAT IISNGCQPTG VAAACLYKAA REQGQFFTQT 
DLAEVAETTP VTIRTRWNEL EEVDDSKSAP A