Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_3144 |
Symbol | |
ID | 7388097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011989 |
Strand | - |
Start bp | 2610450 |
End bp | 2611562 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643652081 |
Product | hypothetical protein |
Protein accession | YP_002550265 |
Protein GI | 222149308 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.428885 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGGCA ATCGAAACAG CACAAGCCTG GAGATTGCTA TGACAGAGAT CGACGATATC ACGGGTTTCA TTCCGCAGCC TGGCCCGATT GCCCTCGTGC TCGGTGCAAC GGGAGGTGTC GGGGGTGCCG TCGCACGGGC GCTGGCCGGT CGGGGATACC ATGTGCGGGC TTTGCATCGC GATGCGGCCC GAATGGCTGC AAAACAGAAA GAACGGCAGC CAGCACTGGA GCCAGTACTG GAATGGGTGC AGGGCGATGC GATGAACCGC GACGATGTCA TCTACGCGGC CAAAGACGCC TCAGTTATCC TGCATGGCGT CAATCCGCCC GGCTATCGCA ACTGGGGGAC ACTGGTGCTG CCGATGATAG ACAACACTAT TGCCGCCGCC CGTGCCAGCG GTGCCTGTAT CCTGATGCCG GGGACGATCT ATAATTATGG CCCGGATGCC TTCCCGCTGC TCAATGAGGA GAGCCCGCAA CATCCGCGGA CGGTCAAGGG CGAGATCCGG GTAGAGTTGG AGCGGCGGCT GGAACAGGCG GCAGGCGAGG GGGTGCGGGT CATTCTTGTC CGGGCTGGTG ATTTCTTCGG GCCTGAGGCG GGAAATAATT GGTTTGCTCA AGGGCTGATT ACCCCCGGCA AGCCCGTGAC CCAGGTTAAC CTGCCGGGCA AGCCGGGCGT CAGCCATAGC TGGGCCTATC TGCCTGATGT CGCGGAAACC TTTATCCGGC TACTGGAACG CGTGCCTGAT ATGCCAGCCT TCGCCCGTTT TCACATGCAG GGCCATGTCG ATACGGACGG ATATGCCATG GCACAGGCGA TCCAGCGGGT AAGTGGCAGC GATTCTGTCC GGTTCAAGCG CTTTGCCTGG TGGATGGTGC CGCTGTTGTC ACCCATCCTG CCGGTGTTCA GGGAATTGCT GGAAATGCGC TACCTGTGGC GCGAACCCAT TGCGCTGGAT AATCGTCGTC TTGTCGAGGT GCTTGGGGAG GAGCCTAGGA CGAGGCTGGA CGTGGCGGTT GCGACGACCT TGAAGAGCCT GAAGTGCTTG CAAACCTCTG CGGTTCACCC TGACGGAAGC CGTTCGATGG CATCTGAAAC CGCGCCGCAA TAA
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Protein sequence | MIGNRNSTSL EIAMTEIDDI TGFIPQPGPI ALVLGATGGV GGAVARALAG RGYHVRALHR DAARMAAKQK ERQPALEPVL EWVQGDAMNR DDVIYAAKDA SVILHGVNPP GYRNWGTLVL PMIDNTIAAA RASGACILMP GTIYNYGPDA FPLLNEESPQ HPRTVKGEIR VELERRLEQA AGEGVRVILV RAGDFFGPEA GNNWFAQGLI TPGKPVTQVN LPGKPGVSHS WAYLPDVAET FIRLLERVPD MPAFARFHMQ GHVDTDGYAM AQAIQRVSGS DSVRFKRFAW WMVPLLSPIL PVFRELLEMR YLWREPIALD NRRLVEVLGE EPRTRLDVAV ATTLKSLKCL QTSAVHPDGS RSMASETAPQ
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