| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2666 |
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| Symbol | tatC |
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| ID | 7386658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 2207128 |
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| End bp | 2207940 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643651738 |
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| Product | SEC-independent protein translocase protein |
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| Protein accession | YP_002549925 |
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| Protein GI | 222148968 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.341088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACG ACATTGAGGA CAAGCCGCAG CCGCTGATCG AGCATCTGAT AGAGCTGAGG
ACGCGGCTGA TCTGGTCTTT GGGTGCGTTT TTCCTGGCCT TCATCGTCTG CTTTTTCTTC
GCCAAGCATT TGTTCAATCT TCTGGTCATC CCCTATAAAT GGGCGGTGAT CTGGGCGCAT
CTGGATGTCA GCAAGGCGGA GCTGATTTAT ACGGCACCGC AGGAGTTTTT CTTCACTCAG
GTCAAGGTGG CGATGTTTTC TGCCATGGTC ATCGCTTTTC CGGTGATTGC TGCGCAGATC
TACAAGTTCG TGGCACCGGG CCTTTATAAA AACGAGCGCC AGGCCTTCCT GCCGTTCCTG
GTCGCCTCTC CGGTCCTGTT CCTGATGGGG GCGGCGCTGG TCTATTTCTT CTTTACCCCG
ATGGTGATGT GGTTCTTCCT GGCCATGCAA CAGGCACCGG GGGAGGGAGA TGTGGCGATT
TCGCTGATGC CGAAAGTTTC GGAATATCTC AGCCTGATCA TGTCGCTGGT CTTTGCCTTC
GGACTTGTGT TCCAATTGCC CGTGGTGACC ACGCTTCTGG CCCGGGTTGG AATCATCGAT
AGCAAGTGGC TGGCCGAAAA GCGTAAATAT TTCATCGTCA TCGCCTTCAT CGTCGCGGCT
GTCCTGACGC CGCCTGATCC GATGTCCCAG ATCGGTCTTG CGCTGCCCAC CATCCTTCTC
TACGAAGTCT CGATCTATGC GGCAAAGCTG GTGGAACGGG AACGGTCGAA GAAAGCTGCG
GCAGAGGCCA GCACCTCGAC CGAGGTGAAA TAG
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| Protein sequence | MSDDIEDKPQ PLIEHLIELR TRLIWSLGAF FLAFIVCFFF AKHLFNLLVI PYKWAVIWAH
LDVSKAELIY TAPQEFFFTQ VKVAMFSAMV IAFPVIAAQI YKFVAPGLYK NERQAFLPFL
VASPVLFLMG AALVYFFFTP MVMWFFLAMQ QAPGEGDVAI SLMPKVSEYL SLIMSLVFAF
GLVFQLPVVT TLLARVGIID SKWLAEKRKY FIVIAFIVAA VLTPPDPMSQ IGLALPTILL
YEVSIYAAKL VERERSKKAA AEASTSTEVK
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