Gene Avi_1760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_1760 
Symbol 
ID7386747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011989 
Strand- 
Start bp1472653 
End bp1473282 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content58% 
IMG OID643651067 
Producthypothetical protein 
Protein accessionYP_002549268 
Protein GI222148311 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.113582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAGCC TCGATTACAG CCAGGTGACG ATCACTGCCC TTATCGCTTC GCTGGCGATT 
GGCTATCTGC TCGGCTCCAT CCCCTTCGGA CTGCTCCTGA CCCGGATGGC GGGCCTGGGC 
GACGTGCGCA ATATTGGTTC CGGCAATATT GGCGCCACCA ATGTGCTGCG CACCGGCAAT 
AAGAAGCTGG CCGCAGCCAC ACTGCTGCTG GATGCCTTGA AGGCAACGGC GGCGGCGCTG 
ATCGCCCAGA AACTGTTCGG CTCCGATACG GTCCATCTGC CGGGCCTGCT TGGGGGCTTT 
GCTGCCTTTA TCGGCCACCT GTTCCCGGTC TGGCTGGGTT TTAAGGGCGG CAAGGGCGTG 
GCCACCTATA TCGGCACATT GCTCGGCATT TTTCCGTTGA TGGTGCTGGT CTTTGCCATC 
GTCTGGCTGT CGATTGCCTT TCTCAGCCGC TATTCCTCGC TATCAGCACT GGTTGCAACC 
CTTGTTATTC CGGTTGCATT GTGGATACTT GGTCAGCCGG AAGCTGCCAT GATCACCTCG 
GCGATGACCG TGATCACCTG GGGCAAGCAC AAGGCGAATA TTGAACGATT GATTTCAGGC 
ACCGAGAGCA AGATCGGTAA AAAAGGATAG
 
Protein sequence
MPSLDYSQVT ITALIASLAI GYLLGSIPFG LLLTRMAGLG DVRNIGSGNI GATNVLRTGN 
KKLAAATLLL DALKATAAAL IAQKLFGSDT VHLPGLLGGF AAFIGHLFPV WLGFKGGKGV 
ATYIGTLLGI FPLMVLVFAI VWLSIAFLSR YSSLSALVAT LVIPVALWIL GQPEAAMITS 
AMTVITWGKH KANIERLISG TESKIGKKG